ggKbase home page

gwf1_scaffold_6009_6

Organism: GWF1_OP11_38_23

near complete RP 42 / 55 BSCG 48 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 3020..3574

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:KKQ30012.1}; TaxID=1618492 species="Bacteria; Microgenomates.;" source="Microgenomates (Shapirobacteria) bacterium GW2011_GWF2_37_20.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 184.0
  • Bit_score: 375
  • Evalue 3.80e-101
ECF subfamily RNA polymerase sigma factor KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 181.0
  • Bit_score: 155
  • Evalue 1.20e-35
RNA polymerase sigma-70 factor, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 155
  • Evalue 1.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWF2_OP11-rel_37_20 → Shapirobacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 555
TTGGAAGATAAGGAATTGGTGGCGCTGTCACTTCAGGACAGTCAGTATTTTTACTGTCTGATGAAACGCTATGAAGACAAGTTGACCAATTATGTCCGCCGTTTTACTTATCTTTCCGACGACGACATTGCCGATGTTGTCCAGGAGTCATTTATCAATACCTACCAGCATCTCAACGACTGCGATTGTAATTTAAAATTCAGCTCCTGGCTTTACCGTATTGTCCACAACCAAGCTATTAATTTTATTAAAAAAAATAAACAATCTTTAAAAATTGAAATGATCGACAATGACGATGAATTCGTCGATTGGTTGGTGGCTGACACCGATATTGAAAAAGAAACCATTACGAAACATTTTAATGATTATGTCACTACCATTTTAGAAAAATTAAAACCCGATTATAAAGAAGTCTTAATTTTAAAATTCTTCGAAGACAAAGATTATCAGGAAATTAGCGACATTTTACAAAAGCCCATGGGAACAGTCGCCACCCTTCTTTCCCGGGCAAAAATTCAATTCAAGGAGATCTATGAAAAAGAAAAAAAGTATTAG
PROTEIN sequence
Length: 185
LEDKELVALSLQDSQYFYCLMKRYEDKLTNYVRRFTYLSDDDIADVVQESFINTYQHLNDCDCNLKFSSWLYRIVHNQAINFIKKNKQSLKIEMIDNDDEFVDWLVADTDIEKETITKHFNDYVTTILEKLKPDYKEVLILKFFEDKDYQEISDILQKPMGTVATLLSRAKIQFKEIYEKEKKY*