ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_29303_2

Organism: Candidatus Portnoybacteria bacterium RIFCSPHIGHO2_02_FULL_39_12

near complete RP 44 / 55 MC: 1 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: 627..1016

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 129.0
  • Bit_score: 257
  • Evalue 1.40e-65
hypothetical protein id=5801916 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 130.0
  • Bit_score: 179
  • Evalue 2.60e-42
30S ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 124.0
  • Bit_score: 155
  • Evalue 1.10e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_08_40_12b → RIF-OD1-8 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGCCTCGTATTGCCGGTGTTAATATTCCGGATAACAAAAGAATAGAAATAGCCCTGACCTATATTTATGGCATAGGACGATTTTTAAGCAATCAAATTTTATCTCAAGCTAAAATAGAGCCGAATGTTTCAGCCGGCAAGCTTTCTTTGGAAGAAGTAAACCGCCTAAGGGATATTGTTGAAAAAAAATATAAAATTGAAGGCGAATTAAGAAGAGGGAAGATGATGAATATTAAACGACTTAAGGACATTGGTTGTTATCGGGGGGGTCGGCACAGCAAGGGTTTGCCGGCGCGCGGTCAAAGAACCAAGACCAATACGCGGACAGTACGGGGAAATGTGCGTCGGACTATGGGTAGCGGAAGGAAGAAAGCGGCGGAGAAGACGTAA
PROTEIN sequence
Length: 130
MPRIAGVNIPDNKRIEIALTYIYGIGRFLSNQILSQAKIEPNVSAGKLSLEEVNRLRDIVEKKYKIEGELRRGKMMNIKRLKDIGCYRGGRHSKGLPARGQRTKTNTRTVRGNVRRTMGSGRKKAAEKT*