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RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_16637_8

Organism: Candidatus Portnoybacteria bacterium RIFCSPHIGHO2_02_FULL_39_12

near complete RP 44 / 55 MC: 1 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: 6372..7604

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, rpod subfamily; K03086 RNA polymerase primary sigma factor Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 410.0
  • Bit_score: 792
  • Evalue 3.70e-226
RNA polymerase sigma factor id=2823713 bin=GWC1_OD1_38_17 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 423.0
  • Bit_score: 510
  • Evalue 2.00e-141
RNA polymerase, sigma 70 subunit, rpod subfamily similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 400.0
  • Bit_score: 393
  • Evalue 6.00e-107

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Taxonomy

R_RIF_OD1_08_40_12b → RIF-OD1-8 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1233
ATGCCCAAAAAAAGAAAAAAGAATAAAATTAAAAAAAAGCGAATTCACCTGCCAAAATTTTCTAAAAGAAAACTTAGGCGGGTAAAAAAGAAGCCGAGGAAAAAATTAAGAAAGAAAGGCATTCAAAAGAAAAAAATTAGAAAGAAGAAACCAGCCAAAAAGAGGAGAAGGCGAATTTTAGTGACCGAAGAAAAAATTCAGGGATTGATTAAACGGGGTAAAGACCGCGGTTTTATTACCGAGTCCGAATTATTACGGGCGATTCCAAACATAGAAAGAGACATCGCCGGACTAGAAGAGCTTTATTTGCGTTTGGAAGCGGTTAATATCAGATTGGTTGAATCAGCCGGCTTATTAGAAGAAGAAACTGCCGAAGATAAAAAAAAGCCGCCTTTGGAGCCGGGGGTCTTTGATAATGTCCAGATGTATTTGAGGGAAATAGGACAAATATCTTTAATCTCGGGTCAGGAGGAAATTGAATTGGCTAAACGGATTGAAAAAGGAGACGAGGCGGCCAGGCAGAAATTAACCCAATCTAATTTGCGGCTGGTGGTGAGCATTGCGAAAAGATACGTGGGTCGCAGTCCCAATTTAACTCTTCTTGATTTGATTCAAGAGGGGAATATCGGGCTTTTTAAAGCCGTAGAAAAATTTGATTATCATCGGGGCTATAAATTTTCCACTTACGCCACTTGGTGGATTCGTCAAGCCATTACCCGAGCCCTGGCTGACCAGTCCAGGACCATCAGAATTCCCGTTCATATGGTTGAGACCATCAGTAAATACACTCAAACCAAGCGCCGGCTTTTGCAGGATTTAGGAAGAGAGCCGTTGCCCGAAGAGATTGCTTCCGAGATGAATGAAAGCGTTGATAAAATCAGACAAATTATGAAGATTTCTCAAGAAACGCTTTCCTTAGAGGTGCCGGTAGGGGACGATGACGAGGGGGGTATTTTGGGAGAATTTATTGAAGACGAAAAAAGTATTTTGCCTTCTCAAGCCGCGGCCAGAAAATTACTGACAGACCAGATTAAAGAGATTTTGATTGATTTGGCTCCCCGCGAGCAAAGGATTTTAAAAATGCGTTTTGGCTTAGACGACGGCATTACCCATACTTTAGAAGAAGTGGGGAATGAGTTCGGCGTGACCAGAGAACGGATTCGTCAGATTGAAGCCAAGTCCCTGGAAAAAATCCGGCAACATCGGGGGCTAAAGAAATTAAAGGGCTATTAA
PROTEIN sequence
Length: 411
MPKKRKKNKIKKKRIHLPKFSKRKLRRVKKKPRKKLRKKGIQKKKIRKKKPAKKRRRRILVTEEKIQGLIKRGKDRGFITESELLRAIPNIERDIAGLEELYLRLEAVNIRLVESAGLLEEETAEDKKKPPLEPGVFDNVQMYLREIGQISLISGQEEIELAKRIEKGDEAARQKLTQSNLRLVVSIAKRYVGRSPNLTLLDLIQEGNIGLFKAVEKFDYHRGYKFSTYATWWIRQAITRALADQSRTIRIPVHMVETISKYTQTKRRLLQDLGREPLPEEIASEMNESVDKIRQIMKISQETLSLEVPVGDDDEGGILGEFIEDEKSILPSQAAARKLLTDQIKEILIDLAPREQRILKMRFGLDDGITHTLEEVGNEFGVTRERIRQIEAKSLEKIRQHRGLKKLKGY*