ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_30914_14

Organism: Candidatus Portnoybacteria bacterium RIFCSPHIGHO2_02_FULL_39_12

near complete RP 44 / 55 MC: 1 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: 9945..10631

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GU79_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 228.0
  • Bit_score: 279
  • Evalue 4.20e-72
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 228.0
  • Bit_score: 450
  • Evalue 1.10e-123
rpsC; 30S ribosomal protein S3 similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 228.0
  • Bit_score: 226
  • Evalue 9.20e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_08_40_12b → RIF-OD1-8 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 687
ATGGGACAAAAAGTTCATCCATTGGCTTTCCGAATAGGCGTTTTAGCTAATTGGAAATCCCGATGGTTTAATAAAAAACAGTATAGCGAAATGTTAAAGCAGGATATTAAACTGCGGGATTTTATTATGAAAAAATTAGATAAGGCCGGTCTCAACCGGATAGAAATAGAACGTTTAGCCAATTCTGTAAAAATTATTATTCATACAGCCCGGCCCGGTTTAGTGATTGGCCGCGGCGGCAGCGGCATAGAAGATCTTAAAAAAGAGATAAACCAGATAATTCAGAAAGAAATTAAAAAGCATGATTTGACCGGCCGCGGACAAAAAGAAGCGAAAGTCCCTAAATTTGAGCTCCGCTTGGAAATAGAAGAAGTGAGACAGCCGGAAAGTCAGGCGGCTATTGTCGCTCAAAATATGGTCGAGCAGATAGAGAAACGTCTGCCTTATCGCCGAGTGCTGAAACGCACTTTAGACAGAATTAAGCAGAATAAGGAAGTTCAGGGCGCTAAAGTGATGGTCAAAGGGCGATTGGACGGCGCTGATATAGCCAGAAGGGAGTGGTTAAAGGTTGGTCGGATTCCCCTTCAAACTCTTCGTTCCGATATTGACTATGCTCAGGCAACTGCTTACACTACTTATGGCACAGTCGGGGTGAAGGTTTGGATTTATAAGGGGGAGATTTTTTAA
PROTEIN sequence
Length: 229
MGQKVHPLAFRIGVLANWKSRWFNKKQYSEMLKQDIKLRDFIMKKLDKAGLNRIEIERLANSVKIIIHTARPGLVIGRGGSGIEDLKKEINQIIQKEIKKHDLTGRGQKEAKVPKFELRLEIEEVRQPESQAAIVAQNMVEQIEKRLPYRRVLKRTLDRIKQNKEVQGAKVMVKGRLDGADIARREWLKVGRIPLQTLRSDIDYAQATAYTTYGTVGVKVWIYKGEIF*