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RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_44014_7

Organism: Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_43_100

near complete RP 37 / 55 BSCG 42 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(5811..6128)

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 105.0
  • Bit_score: 212
  • Evalue 3.10e-52
transmembrane_regions id=5227144 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 37.2
  • Coverage: 86.0
  • Bit_score: 70
  • Evalue 1.10e-09

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Taxonomy

RLO_OD1_Giovannonibacteria_43_11c → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 318
ATGAAATTTAATTTAATACCAGTAGCGCACGCTCAAACAATCGGAAGTATTGTTGATACAATAATAGATTTCTTGGATTCAATAATCCCGATTTTGTTCTTAATAGCAACAATAGTTTTTCTTTGGGGCATAATTCTTTTCATAACTTCAGGCGGGGACGAAGAGAAAAGAAAAGAAGGAAGGCAATATATAATTTTCGGCTTGATAGGGCTTTTTGTCATGGTGGCAATTTGGGGAATCGTGAATGTTCTTGTTGATTTCTTTGATTTCGGAGGCGTTATTGCACCCGACCTCCCAGACCTCCCCGGACGCCCTTAA
PROTEIN sequence
Length: 106
MKFNLIPVAHAQTIGSIVDTIIDFLDSIIPILFLIATIVFLWGIILFITSGGDEEKRKEGRQYIIFGLIGLFVMVAIWGIVNVLVDFFDFGGVIAPDLPDLPGRP*