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RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_44014_10

Organism: Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_43_100

near complete RP 37 / 55 BSCG 42 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(6865..8130)

Top 3 Functional Annotations

Value Algorithm Source
family 1 extracellular solute-binding protein KEGG
DB: KEGG
  • Identity: 23.3
  • Coverage: 442.0
  • Bit_score: 106
  • Evalue 2.60e-20
transmembrane_regions Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 421.0
  • Bit_score: 825
  • Evalue 3.10e-236
transmembrane_regions id=5803525 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 35.1
  • Coverage: 433.0
  • Bit_score: 282
  • Evalue 5.40e-73

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Taxonomy

RLO_OD1_Giovannonibacteria_43_11c → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1266
ATGAAAATAGGTAAATTGCAAATCATAATAACTGCATTAGCTATAGTGGCGGGAATTTTGGCAGTTCTGGTTTTCTCTGGAGTTCTTCCTGGATATGGCGGGTCTGGCTCGAAAAATAGGGTGTCGTTGACTATGTGGGGGACTATAAGCGAAAGCGCGTTCAAAAATACTCTTATAGATTTAAAAAAATCCAATATATATATAACTTATCAGGAAAAAAATCCGTCAACTTTTGAGCGGGAATTTATCGACGCGCTCGCCCGCCAAAAAGGTCCGGACTTGATAATTTTTCCATCTGAGATGATACTCCCCGAAAAAAACAAATTACAAATAATACCTTTCGAAACCATAGGCGAGCGCCTTTTTCGGGATACCTTCGCCGACGGCACGGAATTACTTTTAACCGAAACTGGTGCCGCTGGAATTCCTATATTAATTGACCCCATAGTCCTCTACTGGAATAAGGATATTTTCAGGAACGAGTCCATTGCCGATTCACCAAAAACATGGAATGAATTTCTCACTACATCACAAGTTCTTACAAAATTCGACGGCTCGGGGAATATTGCGCGCGCGGGCTCGGCTTTAGGAATTGAGGTAAACGTTAATCATTTCAAAGAGATCGTCTCTCTCTTGGTGTTGCAAACCGGTTCACCAATTATCGATTCCAAAACACTTAAGGTAAAATTTGACGGCATGAATGAAGCTTTAAGATTTTTTACAGAATTTTCAGACCCCCAAAAGTTTTCCTACTCTTGGGCTAAATCAATGCCAGAGTCCAAGGACGCCTTCATAAAAGAATCCCTCGCTATTTATTTCGGTTTTGGGTCGGAGTACCATTCTCTAAAGGAGAAAAACCCACATCTTAATTTTGACATATCGGAAGTTCCTCAAGTATTAAACGGAAAGCTTTCATTAACTTACGGAAAATTTTATTCAATTGGCATAACAAGTCAGGCAAAAAATTTCGCGGGCGCACTTAGCGCGACCCAGGCAATGGCATCGAAAGAGCAAGTGCAAAAAATATCCGAGGGTGCCTTTATGGCTCCGGCCAGAAGAGACCTGCTCAAAGAAGGCACTACAAACGCTCCTCTACAGACAATATTTAAACAAGCTATAAAGTTCAGAAGCTGGCTTGATATAAATTATGAAAAAACTTCTGAAATCTTTGCGGGTATGATAAAATCCGTCTATACAAGAACTAAAACGGAAGAACAAGCAAGCAAAGATGCAAAAGATCAACTCGACGCTTTATACAACCAATAA
PROTEIN sequence
Length: 422
MKIGKLQIIITALAIVAGILAVLVFSGVLPGYGGSGSKNRVSLTMWGTISESAFKNTLIDLKKSNIYITYQEKNPSTFEREFIDALARQKGPDLIIFPSEMILPEKNKLQIIPFETIGERLFRDTFADGTELLLTETGAAGIPILIDPIVLYWNKDIFRNESIADSPKTWNEFLTTSQVLTKFDGSGNIARAGSALGIEVNVNHFKEIVSLLVLQTGSPIIDSKTLKVKFDGMNEALRFFTEFSDPQKFSYSWAKSMPESKDAFIKESLAIYFGFGSEYHSLKEKNPHLNFDISEVPQVLNGKLSLTYGKFYSIGITSQAKNFAGALSATQAMASKEQVQKISEGAFMAPARRDLLKEGTTNAPLQTIFKQAIKFRSWLDINYEKTSEIFAGMIKSVYTRTKTEEQASKDAKDQLDALYNQ*