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RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_26076_20

Organism: Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_43_100

near complete RP 37 / 55 BSCG 42 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 15114..16784

Top 3 Functional Annotations

Value Algorithm Source
general secretory pathway protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 556.0
  • Bit_score: 1077
  • Evalue 0.0
pilB1; type IV-A pilus assembly ATPase PilB; K02652 type IV pilus assembly protein PilB id=5803215 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 48.7
  • Coverage: 558.0
  • Bit_score: 542
  • Evalue 3.80e-151
general secretory pathway protein E similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 545.0
  • Bit_score: 388
  • Evalue 2.60e-105

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Taxonomy

RLO_OD1_Giovannonibacteria_43_11c → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1671
ATGGCTGACTTTGAAGAATCAAAAGGAAAGAGCAGATTTGCCGAACTTAGGGACAAAGAAGAGGAAGAATTAGCCCAAGTTATGGCCAAAAAACGCGGGCTTCCCTATTTGGATTTGACCTCGATTACAATTGATCTCGATTCCCTTAAACTAATTTCCGAAAAGGATGCGAGGGACGGGAAAATAGTCGTCTTTCAATCCGTCGGCAAAAAAATATCCGTAGCACTCGTCAACCCCGAGATTTTGAAAACCAAACAGATAATCGAAGATCTTAAAAATAAAAGATTTGAATTGGAGCTTTTTTTGGTCTCGCCGAAAAGCCTTGAGAAAGCATTTTCAAGATATGCCGAACTTCCCGCGTTCGAGGAAATCAAATCCGCGATGGTCGCCGTCTCGCAAAAGCGGCTCGATGAATTCCAAACTAAAGTAAAAAAAATATCCGATCTTAAAACTCTGCTTCTGGGAATAGGGGAAACTGAAGAAACAAGGAAAGTTTCGGAAGTGCTGGAGATGATAATTGCGGGAGCGCTTTCTCTCGACGCATCCGATATACATATTGAGCCCGCGGAAGTTAATGTCGTAGTCCGGTACAGAATGGACGGCGTCCTTCAAGAAGCGGTTTCTTTTCCGCAGAAAATATATAAAATGCTCTTGTCCAGAGTAAAATTGATATCGGAACTGAAACTAAATATTAAAGATAAGGCGCAGGACGGAAGGTTTACAATCAGGACGCGAGATACTGATATTGAAGTTAGGACCGCAACGCTTCCCGGCCCGAACGGAGAGGCGGTCACTTTGAGAATACTTCACCCGAAAACAATCGCGCTCAAACTCGAAGACTTGGGAATGAATCCCCATTTCTACGCGATAATACAAAAACAGCTCGATAAGCCAAATGGAATGATTTTGACTACTGGACCAACGGGATCCGGCAAAACAACAACGCTTTACGCCTTCGTTAAAACTGTAAACGAACCGGGCATTGAAATAATAACGATAGAAGACCCGATAGAATACCATCTGCCATCGGTCACGCAAACACAAGTCGATCCGGAGAAAGGATATGATTTTTCAAATGGGCTCCGCGCGATTTTGCGCCAAGACCCCGACATTATACTCGTGGGCGAAATCCGCGATTTCGAAACGGCCGAGATAGCGATGCACGCCGCGCTGACCGGACATCTTGTCTTCTCAACCTTGCACACAAACGATGCGCCAGGAACCGTCCCCCGATTGATAGATATGGGGGTCAAGCCAAACATAATAGCGCCCGCGATAAATATGGCTATGGCTCAAAGGCTTGTGCGAAAACTTTGCAAGGCCTGCAAAAAGCGGGTCGAGCCAAGCACGGATGATCTTAAAAAAATAAAAGCGGAGATGGATAAATTTCCTTCAGGAATCGAGAAGCCTGATTTAAAAACGGCGGAATATTTTGCCGCCGTTGGGTGCGATGAATGCGGAGGGACGGGGTACAAAGGACGGATAGGAGTTTTTGAAGGCTTTGAATTTGACGATAATATAGAGAAAATGATTCTGACCGAGCCCTCCGAATCTGCACTGCGCCAAGCCGCGATAAAGCAAGGGATGCTGACTATGAAACAGGATGGAATTATAAAGTTACTCTCTGGTGTAACAACGCCCGAAGAGTTAGAAAGAGTAGTAGGGTCCTGA
PROTEIN sequence
Length: 557
MADFEESKGKSRFAELRDKEEEELAQVMAKKRGLPYLDLTSITIDLDSLKLISEKDARDGKIVVFQSVGKKISVALVNPEILKTKQIIEDLKNKRFELELFLVSPKSLEKAFSRYAELPAFEEIKSAMVAVSQKRLDEFQTKVKKISDLKTLLLGIGETEETRKVSEVLEMIIAGALSLDASDIHIEPAEVNVVVRYRMDGVLQEAVSFPQKIYKMLLSRVKLISELKLNIKDKAQDGRFTIRTRDTDIEVRTATLPGPNGEAVTLRILHPKTIALKLEDLGMNPHFYAIIQKQLDKPNGMILTTGPTGSGKTTTLYAFVKTVNEPGIEIITIEDPIEYHLPSVTQTQVDPEKGYDFSNGLRAILRQDPDIILVGEIRDFETAEIAMHAALTGHLVFSTLHTNDAPGTVPRLIDMGVKPNIIAPAINMAMAQRLVRKLCKACKKRVEPSTDDLKKIKAEMDKFPSGIEKPDLKTAEYFAAVGCDECGGTGYKGRIGVFEGFEFDDNIEKMILTEPSESALRQAAIKQGMLTMKQDGIIKLLSGVTTPEELERVVGS*