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RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_581_23

Organism: Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_43_140

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 ASCG 9 / 38
Location: comp(16514..17665)

Top 3 Functional Annotations

Value Algorithm Source
RNA binding S1 domain protein {ECO:0000313|EMBL:KKT63774.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 383.0
  • Bit_score: 752
  • Evalue 3.10e-214
RNA binding S1 domain protein id=2933970 bin=GWC1_OD1_38_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 389.0
  • Bit_score: 384
  • Evalue 9.20e-104
rpfA; 30S ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 352.0
  • Bit_score: 269
  • Evalue 1.60e-69

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Taxonomy

Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1152
ATGGCGAATTTAGCTATGGAAAAAGATATTAAGCCGAATAACGGCATAATGGACGCTTTGCTTAAAGCGCGGCCGAAGGTTTTTCTTAAAATCGGCGATTTAATTGAGGGCTGTGTGCTGGAGCGGGAAGGCGCCAAAGTGTTTTTGGATTTGGGAATTTTCGGCACCGGCATCATCTACGGCCAGGAATATCAAAACGCGCGGGAGCTTATTAAAAATCTGAAACCGGAAGATAAGGTAACGGCAAAAATCGTGGAACTTGAAAATGAAAACGGCTTCGTTGAGCTTTCATTGAAAGAAGCGGGCTCGGAAATGATTTGGAAAGAAGCTAAAGAGCTGAAGGGTTCGCAGGAAGCTTTGAATTTGAAAGTTTTGGAAGCCAACAAAGGCGGCGTGGTTTTGGAATGGCGCGGCATCAAAGGATTTCTGCCGGCGTCGCAACTCAAAGCGTCCCACTACCCGCGAGTTGAGAATGGCGAGAAAGAAAAAATTTTTGACGAGCTTAGAAAATTGGTTGGAGAGGCTATCTCCGTCACCATTTTGGATTTTGACCCCAAAGAAAACAAACTTATTTTTTCAGAAAAAGGCGCGGAGTCAGAAGATTTGAAAAAAGTCGTGGGAAAATACAAAGTCGGCGACATTATTGAGGGAGAAGTTACCGGCGTGGTTGATTTCGGAATATTTATAAAATTAGAGGAAGAGCTGGAGGGGCTCGCCCACATCTCGGAGCTGGATTGGGCTTTGGTGGAAAACCCCAACGCGCTTTTTAAAGTCGGTGAACAAATAAAAGCTAAAATAATTTCAATAGACGGAGACAAAATTTCACTTTCAGTGAAAGCCTTAAAGCCGGACCCCTGGGAAACGCACAAAGAAAAATATAAAAAAGGCGATATTGTGGAAGGAAAAGTTTTGCGTTTAAATAAATTCGGCGCGCTGATAACTTTGGACACCGGCATCTACGGACTCGCCCATATTTCGGAATTCGGCACGGAGAAAAAAATGCGCGAGATGGTTTTGGCCGGCGAGTCATATTTTTTCCAGATAGTGAACTATAAACCGGAAGATAAAAAACTTTCGCTTTCGTTTCTCGGGAAAAAAGGCGAAGCGCCTGTGGCTCCGAAAGAGGAAGTGCAAGAAAATCAGGAAAAATAA
PROTEIN sequence
Length: 384
MANLAMEKDIKPNNGIMDALLKARPKVFLKIGDLIEGCVLEREGAKVFLDLGIFGTGIIYGQEYQNARELIKNLKPEDKVTAKIVELENENGFVELSLKEAGSEMIWKEAKELKGSQEALNLKVLEANKGGVVLEWRGIKGFLPASQLKASHYPRVENGEKEKIFDELRKLVGEAISVTILDFDPKENKLIFSEKGAESEDLKKVVGKYKVGDIIEGEVTGVVDFGIFIKLEEELEGLAHISELDWALVENPNALFKVGEQIKAKIISIDGDKISLSVKALKPDPWETHKEKYKKGDIVEGKVLRLNKFGALITLDTGIYGLAHISEFGTEKKMREMVLAGESYFFQIVNYKPEDKKLSLSFLGKKGEAPVAPKEEVQENQEK*