ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_9758_3

Organism: Candidatus Niyogibacteria bacterium RIFCSPHIGHO2_01_FULL_45_28

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: 2814..3293

Top 3 Functional Annotations

Value Algorithm Source
site-specific DNA endonuclease Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 317
  • Evalue 1.40e-83
Homing endonuclease id=2722907 bin=GWC1_OD1_38_17 species=Synechococcus sp. C9 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 53.0
  • Coverage: 151.0
  • Bit_score: 153
  • Evalue 1.40e-34
site-specific DNA endonuclease similarity KEGG
DB: KEGG
  • Identity: 31.5
  • Coverage: 149.0
  • Bit_score: 80
  • Evalue 4.30e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_OD1_45_48 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 480
GTGGGAAGTCGATCTAAAATTGATTTAGCGTATATCGCCGGTTTTCTTGACGGCGATGGCAGCTTGATGTTGCAAGTTAAGAAACGTAAGGACGGCAAATTAAAGAAAAGATTCATGTGCACGATCTGTTTTTATCAGGATTCAAGACATGCGGAACCGCTTAAATGGATTCGTAAAATTCTTGGAATAGGTTATATTTCAAGGCGTAACGACGGAATTACTGAATTGCGTATAAACGGATTCAAGCAGACGCATGACATCATAAAAGTTCTTAGGCCATTTATAAAATTTAAGAAAAAACAGGCGACCGCATTACATGATGCGTCAAATCTGTTAAGCCTTAAAAAATATAATCGGCTGACAGACGCGGAGTTGCGAAAGATTGCGGCATATATCCTAACAATCCAGAAAGAAAATTACGCGACTAAAACCAAGAAAACAAAACAAGATTTAGTTTCAATTTTAGGTCTGACCCCGTAA
PROTEIN sequence
Length: 160
VGSRSKIDLAYIAGFLDGDGSLMLQVKKRKDGKLKKRFMCTICFYQDSRHAEPLKWIRKILGIGYISRRNDGITELRINGFKQTHDIIKVLRPFIKFKKKQATALHDASNLLSLKKYNRLTDAELRKIAAYILTIQKENYATKTKKTKQDLVSILGLTP*