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RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_25620_7

Organism: Candidatus Niyogibacteria bacterium RIFCSPHIGHO2_01_FULL_45_28

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: comp(4008..4550)

Top 3 Functional Annotations

Value Algorithm Source
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 180.0
  • Bit_score: 352
  • Evalue 3.30e-94
50S ribosomal protein L6, chloroplastic id=3736641 bin=GWC2_OD1_43_27 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete) similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 180.0
  • Bit_score: 194
  • Evalue 8.30e-47
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 177.0
  • Bit_score: 173
  • Evalue 4.30e-41

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Taxonomy

R_OD1_45_48 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGTCTAGATTAGCAAAAAAACCAATAGAAATTCCCGACGGGGTTAAGGTTGAGTTCGCGGACGGGGTTTTAAAAGTGTCGGGACCCAAAGGGGAGTTGGGCCGAAATGTTCCGCGGGCCGTGCTTTTTGATATTTCATCTAAAGAAGTCGTGGTAAAACCGGCTGGTGATCCCAAAGAAATCTCTTCTTTTTTGGGAACATGGGTTCGTCATTTGCAAAACATGATTTATGGCGTAACCAAGGGTTTTGAAAAAAAACTGGAATTGGAGGGGGTTGGGTTCCGGGCCGAGGTCAGAGAGAAAGAGCTTGTGCTCAGTCTGGGCTTTTCTCATCAGGTAGTCGTAGTTTCCCCTCCCGGAATATCTTTTGCGGTTGAAAAAAATATTATAACCGTTTCCGGGGCGGACAAAGAGGCGGTCGGCAATGTGGCGGCGGTGATAAGAAGTAAAAGAAAACCGGAACCGTATAAAGGCAAGGGTATCCATTATAAAGGAGAAGTTATCAGGAGAAAATCAGGCAAAAAAGTAGCCGCTTCGGCCTAG
PROTEIN sequence
Length: 181
MSRLAKKPIEIPDGVKVEFADGVLKVSGPKGELGRNVPRAVLFDISSKEVVVKPAGDPKEISSFLGTWVRHLQNMIYGVTKGFEKKLELEGVGFRAEVREKELVLSLGFSHQVVVVSPPGISFAVEKNIITVSGADKEAVGNVAAVIRSKRKPEPYKGKGIHYKGEVIRRKSGKKVAASA*