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RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_54588_4

Organism: Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_48_180

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: 2962..3642

Top 3 Functional Annotations

Value Algorithm Source
RNA pseudouridine synthase family protein; K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 226.0
  • Bit_score: 457
  • Evalue 1.20e-125
rsuA; pseudouridylate synthase specific to ribosomal small subunit (EC:4.2.1.70); K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] id=5803594 bin=OD1_GWC2_34_28 species=Eubacterium hallii genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 51.1
  • Coverage: 233.0
  • Bit_score: 232
  • Evalue 3.40e-58
pseudouridine synthase family 1 protein similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 223.0
  • Bit_score: 206
  • Evalue 7.50e-51

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Taxonomy

R_SM2F11_48_13 → SM2F11 → Bacteria

Sequences

DNA sequence
Length: 681
ATGGAGTTTCCAATCAGAATAAATCATTACTTGGCTCTAAAACAATACTGTTCCCGTCGCATGGCTGACAAACTGATCGCGGGCGGTAAGGTCAAAATCAATGGCAAGGTCGCGGCCATTGGCCAGAAGGTGAACGAAGCAGACCGCGTTGAGGTTGATCTGCCTGCAGTTAAAAAAATCTCGGAAGGCCGAGTGTATTTAGCATACCACAAACCAGTGGGAATTGATACCCACGCAGTGAAGTTCAAAAACCATCCCGGCGTTTTTCCAATCGGCCGTTTGGATAAAAATTCGCATGGACTGATCTTGATGACTAATGACGGCCGTGTGACCGACCGCATGCTCAATCCCAAATACGATCACGAAAAAGAATATACGGTTACGGTTGATAAAAAACTACGCCCCGGATTTCTGGAACGCTTGCGGACGGGAATCACGATCGATGATTATGTTACGAGACCTGCAAAGGTTACGCAGTTAAATGATCACAAATTTAAAATTGTCTTGACTGAAGGGCGGCATCACCAGATCAGGCGCATGTGCGACACTTTTGGTTTCACGGTGCGAAGCTTGAAGCGCGAGCGGATCATGAATATTAAACTCACCGGACTAGCGCAGGGACAGCAGAAGCAGCTTGGCGGCGCAGAATTGAAACTTTTTCTAAAAAACCTCGGACTCTAA
PROTEIN sequence
Length: 227
MEFPIRINHYLALKQYCSRRMADKLIAGGKVKINGKVAAIGQKVNEADRVEVDLPAVKKISEGRVYLAYHKPVGIDTHAVKFKNHPGVFPIGRLDKNSHGLILMTNDGRVTDRMLNPKYDHEKEYTVTVDKKLRPGFLERLRTGITIDDYVTRPAKVTQLNDHKFKIVLTEGRHHQIRRMCDTFGFTVRSLKRERIMNIKLTGLAQGQQKQLGGAELKLFLKNLGL*