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RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_14994_12

Organism: Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_48_80

partial RP 37 / 55 MC: 1 BSCG 37 / 51 ASCG 7 / 38
Location: 10561..11295

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=GWA2_OD1_47_10b similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 245.0
  • Bit_score: 471
  • Evalue 8.70e-130
RNA polymerase sigma factor id=2823713 bin=GWC1_OD1_38_17 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 252.0
  • Bit_score: 299
  • Evalue 3.20e-78
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 234.0
  • Bit_score: 235
  • Evalue 2.10e-59

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Taxonomy

GWA2_OD1_47_10b → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 735
ATGATAAAAAAAATAAAAAAGAAAGCTAAAAAAAAGGTTACGCGCGCGTTAACGCGTAAGCGGGCAAAGCCTCCCACGAAAGTAGAAAAGAAAAAAGCAGAACAGGAAAATACTGTTGTGGGTCTTGTTAAGCGCGGAAAAGAACGTGGTTTTATAACGTACAAAGAAATTCTTGCTGCGTTTCCCACGATCGAAGATGATATTTTTCTGCTTGAGGATCTTTACGCGCGGCTTGCGAGTGCCAACGTTGATGTGCTTGAAGCGCAAGAGCTGATTGAAACCGAAGAGGAAGGAAAAAAGAGATCAAAAAAATTGCCGGCGAAGTTTGAAAAAGATTCTTCCCAGGATTCGGTACAGATGTATCTGCGGGAAATCGGTCGGATTTCCTTAATAAAAGCGGAAGAGGAACGCGAACTTGCAAAGCGGATCGAGAAAGGAGACGAAGAAGCAAAAAGCAAGCTTACCCAAGCAAATCTGCGCCTGGTGGTTTCGATTGCAAAGCGCTATGTGGGGCGATCATCGAATCTCTCTTTGCTTGATCTGATACAGGAGGGGAACATTGGTCTTTTTCGCGCTGTTGAGAAGTTTGACTGGCGCAGGGGATACAAGTTTTCTACATACGCGACTTGGTGGATTCGGCAGGCGGTAACCCGCGCAATTGCCGACCAAGCGCGCACGATCCGTATTCCGGTGCATATGGTTGAGACGATATCTAAATTTCAGCAGGTGCGCCGA
PROTEIN sequence
Length: 245
MIKKIKKKAKKKVTRALTRKRAKPPTKVEKKKAEQENTVVGLVKRGKERGFITYKEILAAFPTIEDDIFLLEDLYARLASANVDVLEAQELIETEEEGKKRSKKLPAKFEKDSSQDSVQMYLREIGRISLIKAEEERELAKRIEKGDEEAKSKLTQANLRLVVSIAKRYVGRSSNLSLLDLIQEGNIGLFRAVEKFDWRRGYKFSTYATWWIRQAVTRAIADQARTIRIPVHMVETISKFQQVRR