ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_57689_4

Organism: Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_48_80

partial RP 37 / 55 MC: 1 BSCG 37 / 51 ASCG 7 / 38
Location: comp(1651..1854)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family Tax=GWA2_OD1_47_10b similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 67.0
  • Bit_score: 129
  • Evalue 2.20e-27
sigma-24 (FecI-like protein); K03088 RNA polymerase sigma-70 factor, ECF subfamily id=5802740 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds) similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 54.0
  • Bit_score: 61
  • Evalue 5.40e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_OD1_47_10b → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGAAAGTTAGCTCTACTTACTCCACGATACTGGTAGAGCCAGTGCTTGGCAAACTCTCGCCCGCCTATCAAGAAGTGTTTACATTGCATCACGATAGCGATCTTACATTTGATGAAATCAGCGCACGGCTCGGAAAGTCCATAAATACAGTCAAAAGCCAGTATAGACGAGCGCTTTTAACTCTACGAAAACTTCTCACTTGA
PROTEIN sequence
Length: 68
MKVSSTYSTILVEPVLGKLSPAYQEVFTLHHDSDLTFDEISARLGKSINTVKSQYRRALLTLRKLLT*