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RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_31729_7

Organism: Candidatus Sungbacteria bacterium RIFCSPHIGHO2_01_FULL_50_25

near complete RP 38 / 55 BSCG 41 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: 4983..6584

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GG53_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 37.5
  • Coverage: 501.0
  • Bit_score: 279
  • Evalue 5.80e-72
rpoD; RNA polymerase, sigma(70) factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 533.0
  • Bit_score: 1054
  • Evalue 0.0
rpoD; RNA polymerase sigma-70 factor RpoD similarity KEGG
DB: KEGG
  • Identity: 35.0
  • Coverage: 520.0
  • Bit_score: 272
  • Evalue 2.60e-70

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Taxonomy

R_RIF_OD1_13_50_25 → RIF-OD1-13 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1602
ATGCGGCGAGGAAGAAGAGTTCCGTTTGTCATTGATCCAAACGGCGGTTTCTCAATTTCAGGCGGTTCGTTTGGCGACGAGGGCGATATCCTTTCTCTTGCGCCTCGCGGTGCGGAAGGAATCGCGGGAGAAAACGGGGGTGATCTTGATCGGGAGACCATGTATGATCGCTTGCCGGCAGGCGGGAAACCGACCGCCATCGGGATGTACTTCAAAGAGATGGGGAAAGTCGACCTTCTTACGAAGGAAGATGAAATTTGCTTTGGGAAAGCCATTGATGTTGCTTTTGCGGCAATTGTCCGCGAGATTGTGTTTTTCCCGGTTTTTCAGTCAGCCATTAAATCATTTCGCGTGGATTCGAGGAGAAATCCCTATCGGGGTTCGGGTGAGGAGATATTTATTTCCTCTGATGGCTCGGAAATCAGGCAGAAGCCGACTGTTCGGCAGGCACAAGACATTCTTGAAAAGGTCATTCGCCTTTTTGACCAGCCGACTGACAGGGGAAGAAAGAATGGCGGGTTTTGCATGGACCCGGAACGCGGCGAAGCAATAGTCGAACATCTTCTTCTTTATCGCTTTAATCGAAGGATTCTGAAGAAGATTGCGGATGAAATCGTCGCTGGCACTTCAGACGTTCGGAGTCACCATGAGTTTCTTTGCGGAAAGAACGGACACAACGGTATCGCTTCTTTTTTCTTTGAAGGTGAATGGAGCGAAGAGGACGATTCTTTGAATTTTGAGCTTGCGCGAAAAGGACTCCGGCCGCGTGAGCGTATGCATTCGATTCTTGTGAGGAGGGTTAGGCAGGGCGCGATGAAATTTGCCATGCCGGCTCGAGAAATCCTACAACGAACGCAGCGGATTCGCGCGGCGCTCGAATCAATGCGGGCGCTTGAAAAGGAGTTTGTTGCGGCAAATCTGCGGTTGGTCATCTCGATGGCGAAGCGCTACTCATGGATCAAATCCCTTGATCTTAGTGACATCATTCAAGAAGGGAATTTCGGCCTTATGAAAGCGGTTGAGCGTTTCGACTATCGGCGGGGGTATAAATTCTCGACGTGTGCAACTCCTTGGATCAAGCAGGCCATCACGCGCGCGCTTGCGGATAAAGGGATGCTTATCCGGATTCCGTACCACGTGTTTGAGGAGCGTATCCGTGTTTTTCGGACGAAACAGGCGCTTACCGATGAACTTGGGCATGTGCCGGATGTTGAGGAGATAGCCGAGTATGCAGAGATGCCTGTACACAAAGTTATGCGGCATATCTTTGCGAATGAGCCGGTTTCCCTTGATAAGCCCGTTGGAGACGATGATTCGGTATTGAGTGATTTTGTCGAGGACGAGTCAGCTGAATCGCCGTACGAACTCGTTGAGACGGAAGAGAAGGCGGAGCGCGCTGAAGAAATTCTTAGTGAGCTTTCGCCGAAAGAGCAAACCATTCTTCGAATGCGTTTTGGACTAGATGGCGAGGATCCGATGACTCTTGAGGTTGTCGGTCAGAGATTCAGGGTGACGCGCGAGCGCATCCGCCAGATCGAAACAAAAGCGCTGAATCGCTTGCGAAATCCCATCCGCGCGAAACTCCTCCGCGAATTGATATAA
PROTEIN sequence
Length: 534
MRRGRRVPFVIDPNGGFSISGGSFGDEGDILSLAPRGAEGIAGENGGDLDRETMYDRLPAGGKPTAIGMYFKEMGKVDLLTKEDEICFGKAIDVAFAAIVREIVFFPVFQSAIKSFRVDSRRNPYRGSGEEIFISSDGSEIRQKPTVRQAQDILEKVIRLFDQPTDRGRKNGGFCMDPERGEAIVEHLLLYRFNRRILKKIADEIVAGTSDVRSHHEFLCGKNGHNGIASFFFEGEWSEEDDSLNFELARKGLRPRERMHSILVRRVRQGAMKFAMPAREILQRTQRIRAALESMRALEKEFVAANLRLVISMAKRYSWIKSLDLSDIIQEGNFGLMKAVERFDYRRGYKFSTCATPWIKQAITRALADKGMLIRIPYHVFEERIRVFRTKQALTDELGHVPDVEEIAEYAEMPVHKVMRHIFANEPVSLDKPVGDDDSVLSDFVEDESAESPYELVETEEKAERAEEILSELSPKEQTILRMRFGLDGEDPMTLEVVGQRFRVTRERIRQIETKALNRLRNPIRAKLLRELI*