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RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_12

Organism: Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_50_67

near complete RP 48 / 55 MC: 3 BSCG 46 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 9654..10193

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 352
  • Evalue 2.50e-94
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=5802028 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds) similarity UNIREF
DB: UNIREF100
  • Identity: 32.6
  • Coverage: 181.0
  • Bit_score: 115
  • Evalue 6.40e-23
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 34.7
  • Coverage: 176.0
  • Bit_score: 108
  • Evalue 1.70e-21

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Taxonomy

RHI_SM2F11_48_16 → SM2F11 → Bacteria

Sequences

DNA sequence
Length: 540
ATGGTAGAAGAAGCACAAATCCAGCAATTGGTGGCCAAAGCCAAGCAACAGGATAGGGTCGCTTTTGCGCAGATTTACGACACTTTTGCCCAGCAACTCTATAATTTTCTTCTGGGTAAATTGGCCCACAAGGAAACGGCCGAAGACCTGCTCCAAACCGTATTTTTGAAAGCTTGGAGCAATTTAAACAAATACGAACCGCGAGCCAACGCCAAATTCTCGACCTGGTTGTTTCAAATAGCGAACTTTACGCTGATCGATCATTGGCGGACCCGGAAACCGACTGTGGAAATCAACGAAATCGAGAACCTGGTGCAATTCGCGCAAAAGCCAAAACTTTACGAAGAATATGCCTATCTGTCGCAAGCCCTGCAAACTCTGCCCTTGGCATATCAGACCGTGCTCGACTTGCGATTCCGCCAGGATTTATCAGTTGAGGAAGCCGCTCATATCATGAATAAAAGCCGGGTCAGCATTCGCGTGCTCCAGCATCGGGCGATCCGAGCACTGCGCAAAAAACTTGGGGACAAAGCAATCTAA
PROTEIN sequence
Length: 180
MVEEAQIQQLVAKAKQQDRVAFAQIYDTFAQQLYNFLLGKLAHKETAEDLLQTVFLKAWSNLNKYEPRANAKFSTWLFQIANFTLIDHWRTRKPTVEINEIENLVQFAQKPKLYEEYAYLSQALQTLPLAYQTVLDLRFRQDLSVEEAAHIMNKSRVSIRVLQHRAIRALRKKLGDKAI*