ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_69844_6

Organism: Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_50_67

near complete RP 48 / 55 MC: 3 BSCG 46 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(5322..5756)

Top 3 Functional Annotations

Value Algorithm Source
helix-turn-helix domain-containing protein id=5802816 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds) similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 143.0
  • Bit_score: 106
  • Evalue 2.40e-20
Helix-turn-helix domain protein {ECO:0000313|EMBL:KKQ71312.1}; TaxID=1619055 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_38_36.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.8
  • Coverage: 143.0
  • Bit_score: 106
  • Evalue 3.30e-20
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 82.0
  • Bit_score: 69
  • Evalue 9.10e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

zPERA2_38_36 → Peregrinibacteria → Bacteria

Sequences

DNA sequence
Length: 435
ATGAAACTTAAAAATTTTAAACGGAAGCTCCTGGAAGAGAACAAGAGTTTTAAGAAGGAGTATTTTAGTTACGATTTGGCATTCGAGATTGGTCAAATGGTTCAAAAGGAAAGGGTGGCAAGGGGCCTCACACAGGGGCAACTCGCAAATGTCGTTGGTACGAAGCAGCCAAGCATAGCGCGAGTAGAAAATGGAAAAGTCCTGCCAAGCCTCAGGTTTTTACAAAAACTTGCCCATGCATTTGGCGCCTCTCTTGTACCACCCCAGATCACAAGTTCTCCGACCGGGCCCACATCTTTCGACGCCCCGACTATCCAGTACGGGGTAGTCCTAGTTGAGGGGGGGTACATTGATCCAGAAATTAGTCGCAGTAATCTACTCTTCTCTCAGATAAACCACAAAGAAAGCGAAAACTTAACAACTTCAAGCAGATGA
PROTEIN sequence
Length: 145
MKLKNFKRKLLEENKSFKKEYFSYDLAFEIGQMVQKERVARGLTQGQLANVVGTKQPSIARVENGKVLPSLRFLQKLAHAFGASLVPPQITSSPTGPTSFDAPTIQYGVVLVEGGYIDPEISRSNLLFSQINHKESENLTTSSR*