ggKbase home page

RIFCSPHIGHO2_01_FULL_OP11_49_18_rifcsphigho2_01_scaffold_18063_4

Organism: Candidatus Chisholmbacteria bacterium RIFCSPHIGHO2_01_FULL_49_18

partial RP 42 / 55 MC: 3 BSCG 40 / 51 ASCG 8 / 38
Location: comp(3288..5747)

Top 3 Functional Annotations

Value Algorithm Source
1A family penicillin-binding protein id=15190975 bin=GWC1_OP11_49_16_COMPLETE species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 717.0
  • Bit_score: 915
  • Evalue 4.20e-263
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 672.0
  • Bit_score: 532
  • Evalue 2.80e-148

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OP11_03_49_14 → RIF-OP11-3 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 2460
ATGCCGAGACTAGATTTTAAACGGAAGCTTCGCGCTGGTAGCGTGGTATCAGGACTTCTGGAAAAGCCAGCCAATGGTGCGAGTCAAAAAACATCATCAAGCGGGAAGAGGAAAAACCCGGATATTCACAGGAATGGTCTGCTTCGGGGGGATGAAAATGGCTCTGATCACCCTTGGTTAGCCAAGCGGCTCGCATCTGGGAAAAAGATGATCAGAGAATTCTGGTACGTTTTTTGCGTACTGATCCTCATCGCCATCGTGGCGTACGTCACCATTATCAAAGATCTCCCCTCTCCGGGAAAACTCAAGCAGGCTGACGTCTTTTCAGCCTCAACCAGAATCTATGATCGAAACGGAGTTCTACTCTTCGAGATTTATGCGGACAGAAACCGGACTCCGGTATCCCTGAAGGACCTTCCGAAATACTTGAGCCAGGCGCATATCGCCGTGGAAGATAAAAATTTTTACAAACATAATGGATTTGCATCGGAAGGCCTTCTGCGGGCGATGCTCAATACCGTCTTCCGCAGAAAACTGCAGGGAGGCTCGACAATCACCCAACAACTTGTCAAAACGGCGCTCTTGACGCCCGAGCGGACGGTTCAGAGAAAAATCCGGGAAGCGATATTGGCGCTGACGGTGGAGCTCATCTACTCAAAAGACGAAATCCTCGAGATGTATCTCAATCATGTCCCCTACGGAGGCACAGCCTGGGGAATCGAGGCCGCAGCCCAGACTTATTTTAATAAGTCCGCGAAAGACTTGAGCCTCTCCGAAGCGAGTTTTCTTGCCGGCCTTCCTGCTGCGCCAACCCGCTATTCTCCTTTCGGCGCCAATCCCGGAATTGCCAAGGATCGACAAGAGCTGGTACTTTCACGCATGGTTGAAGACGGCTATATCGGGCAGCAGGAAGCCGATGAGGCGAAAGCCTCGGAGTTGAAACTGACCACCCCAACGGTGGACATCAAAGCGCCGCATTTCGTTCTCTGGGTAAAAGAACTGCTGGTTGAAAAATACGGAGAGCATCTTGTGGAACGAGGGGGCATGAAGGTAAGCACCACGCTTGACTACCAACTCCAGGAATATGCCCAAGCATCGCTCTCAGCCGAGATCAGCGCCTTGGAAGACTTACGGGTCGGGAATGGGGCGGCTGTAATCACCCATCCGAAAACCGGCGAAATTTTAGCCATGGTCGGCTCTCGGGACTACTTTGACCAGGAACACGACGGGAATGTAAACGTCACCACGCGATTCCGACAACCGGGAAGCTCCATCAAACCAATAAACTATGCGACCGCTTTCGAGACCGGGCGTTTAACGCCTGCCTCCGTGCTCCTTGATGTACCAAGCTGTTTTGTGGTGAGCGGACAGCCGTTGTATTGCCCAAAAAACTACGATAACGCTTTCCATGGTCCGGTACAGGCACGCTTTGCTCTGGGAAATTCATACAATATTCCTGCGGTCAAAACACTCGCCGTCAATTCGATAGAAAGTATGATTGCAACCGGAAGCGCAATGGGTATCACAGGCTGGAATGATCCGACCCACTACGGATTGTCATTAACTCTGGGAGGAGGAGAGGTCCGCATGATTGACATGGCGGTTGCCTTCGGCGTTTTCGCCAACGAGGGCGTCAAAGTCCCCCTGCAACCAATTCTCAAGGTTGAAGACCAAGGGGGTGCTGTATTGGAGCAGTACAATTCGCAGTCGATGGAAGAGCGCGTGAATGAGTTAAACGCCGCGCCGCGCTCGGCCTCACCGGAAAATACTTCCGAACCGACCAGAGCCCTGTCAAGAGAAACAGCCTACCTCATCTCTCATATACTATTAGATAATAATGCGCGCTCCGCTGCCTTCGGCCCGTCATCTCAACTTGTCATTCCCGGAAAAGTGGTCTCTGTCAAAACCGGAACCACCAACGATCTCCGCGATAATTGGACCATCGGCTTCACCCCAAGCTTCTTGGTGGCTGTTTGGGTGGGGAACAACGACAATACGCCGATGCACCCCTACTTGGTTTCAGGAATTACCGGCGCCGCCCCAATCTGGCATGAGATCATGGAAAAAGTGCTTGAAAATCAACAATCCGAATGGCCGGACAAGCCGGAAGACGTCATCGGCTTGGATGTCTGTACGCTTTCGGGATTGCTCCCGAATCCGGATAATCCCTGCCCAACCAGACACGAATTCTTCATCAAGGGTTTTGCACCCTCACAAGTCGAACAAAGCCGGCGGGGTATCTGGATTAAAAAGGACACCGGTCTGCCGCCGGTAGAAGGCGATCTGGAAAACCTGGAGCTCCAGGAACACCTGGTTGTTTCAGACCCCCTCACCAACGACTTTTGCTTGGACTGTCCATGGCCGCAGGAAACTGACGAGCAGGGCCAATTGACCGGAAAGCTGCAATATCCGCAAATCACAATCACCACAACTCCGACGAATAACTCGCCGCAAGATTGA
PROTEIN sequence
Length: 820
MPRLDFKRKLRAGSVVSGLLEKPANGASQKTSSSGKRKNPDIHRNGLLRGDENGSDHPWLAKRLASGKKMIREFWYVFCVLILIAIVAYVTIIKDLPSPGKLKQADVFSASTRIYDRNGVLLFEIYADRNRTPVSLKDLPKYLSQAHIAVEDKNFYKHNGFASEGLLRAMLNTVFRRKLQGGSTITQQLVKTALLTPERTVQRKIREAILALTVELIYSKDEILEMYLNHVPYGGTAWGIEAAAQTYFNKSAKDLSLSEASFLAGLPAAPTRYSPFGANPGIAKDRQELVLSRMVEDGYIGQQEADEAKASELKLTTPTVDIKAPHFVLWVKELLVEKYGEHLVERGGMKVSTTLDYQLQEYAQASLSAEISALEDLRVGNGAAVITHPKTGEILAMVGSRDYFDQEHDGNVNVTTRFRQPGSSIKPINYATAFETGRLTPASVLLDVPSCFVVSGQPLYCPKNYDNAFHGPVQARFALGNSYNIPAVKTLAVNSIESMIATGSAMGITGWNDPTHYGLSLTLGGGEVRMIDMAVAFGVFANEGVKVPLQPILKVEDQGGAVLEQYNSQSMEERVNELNAAPRSASPENTSEPTRALSRETAYLISHILLDNNARSAAFGPSSQLVIPGKVVSVKTGTTNDLRDNWTIGFTPSFLVAVWVGNNDNTPMHPYLVSGITGAAPIWHEIMEKVLENQQSEWPDKPEDVIGLDVCTLSGLLPNPDNPCPTRHEFFIKGFAPSQVEQSRRGIWIKKDTGLPPVEGDLENLELQEHLVVSDPLTNDFCLDCPWPQETDEQGQLTGKLQYPQITITTTPTNNSPQD*