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scnpilot_p_inoc_scaffold_1167_9

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(6904..8337)

Top 3 Functional Annotations

Value Algorithm Source
NodT family RND efflux system outer membrane lipoprotein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPB2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 473.0
  • Bit_score: 810
  • Evalue 1.10e-231
  • rbh
NodT family RND efflux system outer membrane lipoprotein {ECO:0000313|EMBL:EIK91052.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenoph similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 473.0
  • Bit_score: 810
  • Evalue 1.50e-231
RND efflux system outer membrane lipoprotein NodT similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 466.0
  • Bit_score: 530
  • Evalue 4.80e-148

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1434
ATGAACCGTTCCTTCAAGAGCCGCTGGCTGCTCGCGCCCCTGGCCGCCGCCGCGCTCGTGGGCTGCGCCAGCATGCAAGGCACCACGCCGTCCAGCGCGCAGCTGCGCGACGCCGCCTCGCTGGGCCTGAGCGAATCGCGCGCCGCCGCCGAGGTGGCGCCGGTGGAGCCCCAGTGGTGGCGCGCGCTCGGCGATCCGCAGCTCGACCGCCTGGTGGAGCAGGCCCTGCAGGGCAACCCGAACCTGCGCGTGGCGCAGGCGCGCGTGGCCCGGGCCATGGCCGCCGTCGACGGCGTCGACGCCACCAGCGGCCCGCAGCTCAACGGCCAGTTCGACGCCACGCACCAGCGCTTCACCGCCAAGGGCATGGTGCCCCCACCCCTGGCCGGCAGCGTCGAGGACACGGCCACGCTGCAGCTCAACGGCTCCTGGGAAATCGATTTCTTCGGCAAGCACCGCGCCGCGCTCGACGCCGCCCTGGGCACGGCCCAGGCCGCGCAGGCCGAAGCCGCCGCCGCGCGCACGCTGCTGGCCACCAACGTGGTGCGCGGCTACGTGCAGCTGGCGCGCCTGCAGGACCAGCACGAACTGGCGCAGCGCGCGCTCGCGCAGCGAGAGGGCATGCTGGCCCTGGTCAATCAGCGCGTCTCGGCCGGGCTGGACGGCGTGCTCGAACAGCGCCAGAGCGAGGGCGCCGTGCCCGAGGCGCGCCAGCAGATCGAGGCCATCGGCGAGCAGATGCAGCTCACGCGCCACGCGCTGGCGGCGCTGAGCGGCCAGCCCACGCAGGACCCGGCGCCCCAGGCGCCGCGCCTGGCCGGCCTGCGCCCGCTGCCCGAGCCCCAGGCCATCCCCACCGACCTGCTCGGCCGGCGCCCCGACGTGGCCGCCGCGCGCTGGCGCGTGCAGGCCTCGCGCGGCGAGGTGGACAACGCGCGCGCCCAGTTCTATCCCAACATCAACCTGGTGGCCTATGTCGGCCTGTCCAGCATCGGGCTCGACCAGCTCTTCAGCGGCGGCGCCCGGCAGTGGGGCATCGGACCGGCCGTGCGCCTGCCGATCTTCGATGGCGGGCGCCTGCGCGCCAACCTGAGCGGCAAGAACGCCGAGCTCGACACCGCCATCGAGAGCTACAACGCCGCCGTCATCGAGGCCGTGCACGAGGTGGCCGACCAGCTCGCCTCCGCGCGCTCGGTGGCCCAGCAGCGCGCCCAGCAGCAGCAGGCCCTGCAATCGGCCGAATCGGCCTATTCCATCGCCGAGCAGCGCTACCGCGCGGGCCTGTCCAACCACCTGCAGCTGCTGTCCGCCGAAACCGCCGTGCTGGCCCAGCGCCGCCTCGACGTCGACCTGCGCACGCGCGCCCTGCAGGCCCAGGTGAACCTGGCCCAGGCCCTGGGCGGCGGCTGGCGCGCGTCCACCGAACAACCCTGA
PROTEIN sequence
Length: 478
MNRSFKSRWLLAPLAAAALVGCASMQGTTPSSAQLRDAASLGLSESRAAAEVAPVEPQWWRALGDPQLDRLVEQALQGNPNLRVAQARVARAMAAVDGVDATSGPQLNGQFDATHQRFTAKGMVPPPLAGSVEDTATLQLNGSWEIDFFGKHRAALDAALGTAQAAQAEAAAARTLLATNVVRGYVQLARLQDQHELAQRALAQREGMLALVNQRVSAGLDGVLEQRQSEGAVPEARQQIEAIGEQMQLTRHALAALSGQPTQDPAPQAPRLAGLRPLPEPQAIPTDLLGRRPDVAAARWRVQASRGEVDNARAQFYPNINLVAYVGLSSIGLDQLFSGGARQWGIGPAVRLPIFDGGRLRANLSGKNAELDTAIESYNAAVIEAVHEVADQLASARSVAQQRAQQQQALQSAESAYSIAEQRYRAGLSNHLQLLSAETAVLAQRRLDVDLRTRALQAQVNLAQALGGGWRASTEQP*