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scnpilot_p_inoc_scaffold_837_31

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 35582..35863

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S18 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MG56_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 93.0
  • Bit_score: 187
  • Evalue 5.30e-45
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenopha similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 93.0
  • Bit_score: 187
  • Evalue 7.30e-45
rpsR; ribosomal protein S18 similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 93.0
  • Bit_score: 176
  • Evalue 3.40e-42

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 282
ATGGCTGCACCCAAGCGTTTCAACAAAGACAAGCGCCCCAAGCGCAACACCCAGTCGCTGCTTTTCAAGCGCAAGCGCTTCTGCCGCTTCACCGTCGCCAAGGTCGAAGAGGTGGACTACAAAGACATCGACGTCCTGCGCGACTTCATTTCTGAAAACGGCAAGATCATCCCGGCGCGCCTGACCGGCACCCGCGCGATCTACCAGCGCCAGGTCACCACCGCCATCAAGCGCGCGCGCTTCCTGGCCATGCTGCCCTACAGCGATCAGCACCGCGTCTGA
PROTEIN sequence
Length: 94
MAAPKRFNKDKRPKRNTQSLLFKRKRFCRFTVAKVEEVDYKDIDVLRDFISENGKIIPARLTGTRAIYQRQVTTAIKRARFLAMLPYSDQHRV*