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scnpilot_p_inoc_scaffold_1491_21

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(17456..18091)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein, TetR n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNL4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 89.4
  • Coverage: 208.0
  • Bit_score: 362
  • Evalue 2.70e-97
  • rbh
Regulatory protein, TetR {ECO:0000313|EMBL:EIK90804.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 208.0
  • Bit_score: 361
  • Evalue 1.10e-96
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 192.0
  • Bit_score: 212
  • Evalue 9.70e-53

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
GTGAGTTCCGGCGCCGCTTCTCCCGCCAGCCCCGCGCGCAAGTCCCGTGGGGCGGGCGAGGCCGCGCGCGCTCCGCTCACGCCCGACACCTGGATCGAGGCCGCCACCGGGGTGCTGGTGGACCAGGGCATCGACCACGTGCGGGTGGACCTGCTGGCGCAGCACCTGGGCGTCACGCGCGGCAGCTTCTACTGGCATTTCAAGGACCGCGAGGACCTGCTGCGCCGCGTGCTGCAGGCCTGGCGCGAAACGGCCACCGAGAACCTTACGGTGCGCCTGGAGTCGGCGAACGAGGACCCGATGGAACAGTTGCGCGGTGTGCTGTCGCTGCCGTTCCGGGGCCGGGCGGCGGCGCGTGCCGCGCGCATCGAGCTGGCGATCCGCGCCTGGGCGCGGCGCGACCAGATGGCGCGCTTCGCGGTCGACGAGGCGGATTCGAGCCGCATCGGCTACATCGCACAGCTGTTCTCGGCCCTGGGTTTTCCGGTGGTGGAGGCGCGCTCGCGGGCCTTCCTGCTGTACAGCTACGTGGTGTCGGAGTCGCTGATGCCCACGCTGAGCACCCCGGCGCAGAAAGACGACCGGCGCCGCTTCGCCGAGCGCTTGTTCACGCAGAAGCTGGGCGCGGCGGGCTGA
PROTEIN sequence
Length: 212
VSSGAASPASPARKSRGAGEAARAPLTPDTWIEAATGVLVDQGIDHVRVDLLAQHLGVTRGSFYWHFKDREDLLRRVLQAWRETATENLTVRLESANEDPMEQLRGVLSLPFRGRAAARAARIELAIRAWARRDQMARFAVDEADSSRIGYIAQLFSALGFPVVEARSRAFLLYSYVVSESLMPTLSTPAQKDDRRRFAERLFTQKLGAAG*