ggKbase home page

scnpilot_p_inoc_scaffold_1689_15

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 14157..15911

Top 3 Functional Annotations

Value Algorithm Source
succinate dehydrogenase (EC:1.3.99.4) similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 559.0
  • Bit_score: 631
  • Evalue 3.20e-178
Succinate dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTK3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 567.0
  • Bit_score: 918
  • Evalue 4.60e-264
  • rbh
Succinate dehydrogenase {ECO:0000313|EMBL:EIK92543.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 79.5
  • Coverage: 567.0
  • Bit_score: 918
  • Evalue 6.40e-264

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1755
ATGTCGCCACAGCGTGACGGCACCGGCGGGGCCCGGCGCCACGACAACATGGCCCTTCCCGAGGCCGATCTGGTCGTCGTCGGCTCGGGCGCGGCGGGGCTGACGGCGGCCATCGTCGCCCAGCGCCGGGGCATGCGCGTGGTGGTACTGGAGAAGGACGCCCTGGTCGGCGGCACCACGGCGGTTTCCGGCGGTGTGCTGTGGGTGCCGCTCACGGCCAGGGGGCGCCAGCAGAACCCGCAGGATTCGCCAGCGGCCGTGCGCGAGTACCTTCGCCACGAGATGGCCGATCGTTATGCGTCGGATTCGGTGGAGCTGTTCCTGGAGAAGGGGCCGGAAATGGTCGAATTCCTCGAACGCGAGACCGATGTGAGGTTCTGTTCGACGCTCTACCCCGACTACCACCCCGAGGCGCCGGGAGCCAGCCTGATCGGACGCGCCCTCGTGGCCGCGCCGTTCGATACCCGGCGGCTGCGACACGAACGCCGCCGCCTGCGTCCGCCCCTGAAGACCATCACCTTCATGGGCATGATGTTCAACTCGTCGAACGCCGACCTGAAGCATTTCTTCAAGGCCACGCGATCGTTCGCCTCGTTCCTGTATGTCGCCAGACGCCTGGTGTCGCATGGTGTCGACCTGCTGCGCTACGGCAGCGCGGTGCATGTCACTGGTGGCAACGCCTTGGCTGCCGCGCTGTTCAAGGCGGCGGCCATCGACCTCAAGATCCCGGTGCTCACCCACGCCGAGGTAACGGGCCTGATCCGGGACGAGCACGGCATCAAGGGCGTGTCGGGCACCTTCCGGGGCCAGCCCTTTCGGCTGGTGGCGCCGTGCGGGGTGGTGCTGGCCTGCGGCGGGTTTTCGCACGACCAGGCGCTCACGGCCGCGCGCTTCCCGACAGCGCTGGCCGATCGAAAGCCCCTGTCCGCCACCCCGCCATCCATCACGGGAGACGGTATCCGCCTGGCCTTGTCGGCCGGGGGATGCCTGGCGGCACCGTTGCCGCAGCCGGCCGCCTGGATGCCCCTGTCCCTCGTGCCCAGGGGGCGCTCTGGACCCGCGGTCTTTCCCCATTTGCTCGATCGCTACAAGCCCGGTGTCATCGCGGTGCTGCGCAGCGGCCGGCGCTTCACCAACGAGGCCAACTCCTACCACGACGTGTGCTCGGCCGCCCTGCGCGAGGCATCTGACCGCTCCGAGGCCGCGATGTGGCTCATCTGTGACAGCCGTGCGCTGGCGCGCTATGGCCTGGGCTTCGTCAAACCGGCACCGCTGCCGTTTCGCCAGCACCTGAGAAGTGGCTACCTTTGCATGGCCGACACCTTGTTCGATCTGGGCGAGAAACTCGGCGTTGACGCCTCCGAGCTGAGCAAGACCGTCGAGGATTTCAACCGGGCGGCGGCGGCCGGCAGGGACCCCCAGTTCGGGCGGGGTTCGACCGCCTTCAACCGCTTTCTGGGCGACCCGGATTGGAAGCCCAATCCCTGCGTCGCCCCCATAGAACGCCCGCCCTTTTTTGGCCTGAAGTTGCTGGTGGGCGACCTGAGCACTTTTGACGGCTTGCAGGCCGACCTGAGGGGCCAAGTGCTCGCGCAAGATGGCAGCGCCGTCAACGGTCTGTATGTGGTCGGGGCAGACCGCGTGAACATGATGGGCGGTGCCTACCCTGGCCCAGGCATCAACCATGGCCCGCACATGGCGATGGCGTACCACATGGCCAGCACCATCGGGCAGAATGGGTTTTCCGCCAGTTAG
PROTEIN sequence
Length: 585
MSPQRDGTGGARRHDNMALPEADLVVVGSGAAGLTAAIVAQRRGMRVVVLEKDALVGGTTAVSGGVLWVPLTARGRQQNPQDSPAAVREYLRHEMADRYASDSVELFLEKGPEMVEFLERETDVRFCSTLYPDYHPEAPGASLIGRALVAAPFDTRRLRHERRRLRPPLKTITFMGMMFNSSNADLKHFFKATRSFASFLYVARRLVSHGVDLLRYGSAVHVTGGNALAAALFKAAAIDLKIPVLTHAEVTGLIRDEHGIKGVSGTFRGQPFRLVAPCGVVLACGGFSHDQALTAARFPTALADRKPLSATPPSITGDGIRLALSAGGCLAAPLPQPAAWMPLSLVPRGRSGPAVFPHLLDRYKPGVIAVLRSGRRFTNEANSYHDVCSAALREASDRSEAAMWLICDSRALARYGLGFVKPAPLPFRQHLRSGYLCMADTLFDLGEKLGVDASELSKTVEDFNRAAAAGRDPQFGRGSTAFNRFLGDPDWKPNPCVAPIERPPFFGLKLLVGDLSTFDGLQADLRGQVLAQDGSAVNGLYVVGADRVNMMGGAYPGPGINHGPHMAMAYHMASTIGQNGFSAS*