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scnpilot_p_inoc_scaffold_1666_3

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 2832..3740

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003604CD8 similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 301.0
  • Bit_score: 385
  • Evalue 4.20e-104
Transcriptional regulator {ECO:0000313|EMBL:EJL81489.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF similarity UNIPROT
DB: UniProtKB
  • Identity: 65.8
  • Coverage: 301.0
  • Bit_score: 385
  • Evalue 7.80e-104
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 301.0
  • Bit_score: 384
  • Evalue 2.70e-104

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Taxonomy

Polaromonas sp. CF318 → Polaromonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGCATGTCAAAGACCTCGACCTGAACCTGCTTCGGCTGTTTGCCGAGGTGTACCGCGCGGGCAGCGTGAGCCGGGCGGCCGAGCGCCTGGGGCTGACGCAGCCGGCGGTGAGCCATGGCCTCACGCGGCTGCGCTTGCTGGTGAAGGACCCGCTGTTCATGCGCGCCCCCGGCGGGGTGCGGCCCACGCCGCGCGCCGTGGCCTTGGCCGAAGCGGTGCAGGACGCGCTGGACGCTTTGGAAGGCGCGCTCGGGCGCACCAGCGTGTTCGACCCCTCCACCTCGCGCCACCTCTTCCGTGTGCACATGAGCGACATCGGCGAGGGGCGCTTCCTGCCCGAACTGATGGCCTGGCTGCACGCGCAGGCGCCGGGCGTGCGCGTGGCCACGCAGCCGGTGCCGCACGCGGCGCTGGCCGAGTCGCTGGACGCGGGCGCGATCGATTTCGCGTTTGGCTTCCTGCCACAGGTCCGCGAGACGCGCCGCGTGGAACTGCTGCACGACCGCTACGTGGTGCTGATGCGCGCCGGGCACCCCATGGTGGCCTCGCTGCGCAAGCTGCGCGGCGTGGCGCAGCTGCGCGCGCTGCAGCAGCTGGACTTCGTGGCCGTGCGCGCGCACGCGGACACGCTGCGCATCCTGCAGCGCGCCGGCCTGCAGGAGCGCCTGCGCCTGACCACGGAGCACTTCATGGTGCTGCCCTCCATCGTGCAAGCCACCAACCTGTGCGGCGTGATGCCGCGCAACATCGCGCGCGGCTTCGTTCAGGCTGGCGGCTGCACGGTGCTGGAGCCACCCTTCGAGGGCGCCGATTTCACGGTCTCGCTGCACTGGAGCCACCGCTTCGAGGCCGACCCGGCGCACCGGTGGTTCCGCGAGGTCGCGGTCCAGCTGTTCGCCGAGTGCTGA
PROTEIN sequence
Length: 303
MHVKDLDLNLLRLFAEVYRAGSVSRAAERLGLTQPAVSHGLTRLRLLVKDPLFMRAPGGVRPTPRAVALAEAVQDALDALEGALGRTSVFDPSTSRHLFRVHMSDIGEGRFLPELMAWLHAQAPGVRVATQPVPHAALAESLDAGAIDFAFGFLPQVRETRRVELLHDRYVVLMRAGHPMVASLRKLRGVAQLRALQQLDFVAVRAHADTLRILQRAGLQERLRLTTEHFMVLPSIVQATNLCGVMPRNIARGFVQAGGCTVLEPPFEGADFTVSLHWSHRFEADPAHRWFREVAVQLFAEC*