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scnpilot_p_inoc_scaffold_1780_3

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 1887..3038

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter MFP subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MN93_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 383.0
  • Bit_score: 624
  • Evalue 5.30e-176
  • rbh
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:EIK90683.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 383.0
  • Bit_score: 624
  • Evalue 7.40e-176
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 384.0
  • Bit_score: 337
  • Evalue 3.60e-90

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1152
ATGACCACCTCCCGTCTGCGAAAGACCCTCTACTGGGCCCTGGCCGGGCTGGCCGTGGCCGCGCTGGCCTTGGGCGTGGTGCGCGCGCTGCACAAGCGCAGCGCCCAGGCCGCGCAGGCGAACGCCGCCGCCCAGGCCCTGCAGACCGCGCCGGTCTACGAGGTCGCCGCGCGCGACGTGTTCACGGTGCGCCGCCTCGCGCTGCAGCAAACGGCCGAGGTCTCAGGTTCGCTGGTGGCGGTGCAAACCGTGGCCATCAAGGCGCGCGTGGCCGGCGAGCTGCAAGGCCTGAACAAGCGCGAGGGCGACAGCGTGGCCGCCAACGAGGTGGTCGCGCGCATCGACCCGACCGAGCCGCAGGCGCGCGTGCGACAGGCCGAGCAGCAGGCCGAGTCGGCGCTGGCGCAGGTGCGCATCGCGCAGCGCAACCAGAACAACAACCAGGCCCTGGTGCAGCAGGGCTTCATCTCGGCCACCGCGCTGGACACCTCGCAGGCCAACCTGGCCGCGGCCGAGGCCAACCACCGCGCGGCCATGGCCGCGCTGGACATCGCACGCAAATCGCTCGCCGACACGGTGCTGCGCTCGCCCATCGCCGGCCAGATCGCCAGCCGGCCGGTGCGCAACGGCGAGCGCGTGGGCGTCGACACCCGCGTGCTCGAGGTGGTGGACCTCTCGGCCTTTGAGGTGGAGGCCGCGCTGAGCCCGGCCGACGCCGCGCGCATCGCCCCGGGCCAGCGCGCGCGCCTGGTGGTGGAGGGCCTGCCCGAACCGGTGAACGCCGCGGTGGCGCGCATCAACCCCAGCGTGCAGGCCGGCAGCCGCAGCGTGCTGGTCTACCTGCGGCTGACCGCCCAGCCGGGCATGCGCCAGGGCCTGTTCGCGCGCGGCGGGATCGTGGCCGGCACGGTCGAGGCCCCGGCCGTGCCGGTGTCGGCCATCCGCAACGACCGGCCCGAGCCCTACGTGCAGGTGCTGCGCGACGGCGTGGTCAAGCACGTGGCCCTGACGCCCGCGCCCACGGGCAGCGTGGACGGCGTGCCCCACCAGGCGGTGCCCGCCCTGGCCGAGGGCGACACCGTGCTGGCGGCCACGGCCGGCGCCATCCGCGACGGCACGCGCGTGAACCTGGCCGCCGCGGCCAAGCCCTGA
PROTEIN sequence
Length: 384
MTTSRLRKTLYWALAGLAVAALALGVVRALHKRSAQAAQANAAAQALQTAPVYEVAARDVFTVRRLALQQTAEVSGSLVAVQTVAIKARVAGELQGLNKREGDSVAANEVVARIDPTEPQARVRQAEQQAESALAQVRIAQRNQNNNQALVQQGFISATALDTSQANLAAAEANHRAAMAALDIARKSLADTVLRSPIAGQIASRPVRNGERVGVDTRVLEVVDLSAFEVEAALSPADAARIAPGQRARLVVEGLPEPVNAAVARINPSVQAGSRSVLVYLRLTAQPGMRQGLFARGGIVAGTVEAPAVPVSAIRNDRPEPYVQVLRDGVVKHVALTPAPTGSVDGVPHQAVPALAEGDTVLAATAGAIRDGTRVNLAAAAKP*