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scnpilot_p_inoc_scaffold_1780_8

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 7816..8769

Top 3 Functional Annotations

Value Algorithm Source
Type I secretion outer membrane protein TolC n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MN89_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 317.0
  • Bit_score: 566
  • Evalue 2.40e-158
  • rbh
Type I secretion outer membrane protein TolC {ECO:0000313|EMBL:EIK90679.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 317.0
  • Bit_score: 567
  • Evalue 1.50e-158
TolC family type I secretion outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 316.0
  • Bit_score: 417
  • Evalue 3.90e-114

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
GTGCAAGCCGAGCAGGACCTGATCGTGCGCGCCGCGCAGGCCTATTTCGACGTGCTCGCCGCCCAGGACACGCTCACCTTCGTGCGCGCGCAAAAGACCGCGGTGGAACAGCAGCTCGCCGCCGCGCGGCGCAACTTCGAGGTCGGCACCGCCACCGTGACCGACGCGCGCGAGGCCCAGGCCCGTTTCGACCTGGTGATCGCCCAGGAGATCGCGGCCGAGAACGACCTGCGGGTGAAGAAGCTCGCGCTCGACCAGCTGGTGGGCCGCAGCGGTGTGACGCCCCTGCCCCTGGCCACGCCGGTGGACCTGCCGCCGCTGGAGCCCGCCACGCCGCAGGCCTGGCTGGACCGCGCGGGCGACCGGCACCCGGTGATCCTGAGCGCGCAGCGCAACCTGGAGATCGCCAAGCTTGAAACGCAGCGCGCCGAGGCCGGCCACAAGCCCACGGTAGACCTGGTGGGCCAGTACCAGGTGGCGCGCGCGCCGTCCGGCGTGCAGGGCATTCCGGGCAACGTGCGCAACAACAACGCCAGCGTGGGCGTGCAGTTCAACATGCCGCTGTTCGCGGGCTACTCCATCCAGAACCGCGTGAAGCAGACCCTGGCGCTGGAGGAGAAGGCCCGCGCCGACCTCGACGCCGCCCGCCGCACGGTGGACCTGCGCACGCGCAGCGCCTTCCTCGGCCTGGTCTCGGGCCAGGGCCAGGTGAAGGCGCTGGAAGCGGCCGAGACCTCCAGCCAGAGCGCGCTCGAAGCCAACCAGCTGGGCTACCAGGTGGGCGTGCGCATCAACATCGACGTGCTCAACGCCCAGAGCCAGCTCTACCAGACCAAGCGCGACCTGGCCCAGGCCCGCTACAACGTGCTGCTGGGCAGCCTGCGCCTGCGCCAGGCCAGCGGCGAGCTCACGCCCGCCGACCTGCAGGCGGTCGACGCCTTGCTGGCGCGCTGA
PROTEIN sequence
Length: 318
VQAEQDLIVRAAQAYFDVLAAQDTLTFVRAQKTAVEQQLAAARRNFEVGTATVTDAREAQARFDLVIAQEIAAENDLRVKKLALDQLVGRSGVTPLPLATPVDLPPLEPATPQAWLDRAGDRHPVILSAQRNLEIAKLETQRAEAGHKPTVDLVGQYQVARAPSGVQGIPGNVRNNNASVGVQFNMPLFAGYSIQNRVKQTLALEEKARADLDAARRTVDLRTRSAFLGLVSGQGQVKALEAAETSSQSALEANQLGYQVGVRINIDVLNAQSQLYQTKRDLAQARYNVLLGSLRLRQASGELTPADLQAVDALLAR*