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scnpilot_p_inoc_scaffold_1782_12

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 16204..16710

Top 3 Functional Annotations

Value Algorithm Source
LysR type regulator of tsaMBCD n=1 Tax=Comamonas testosteroni RepID=P94678_COMTE similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 169.0
  • Bit_score: 230
  • Evalue 9.80e-58
HTH-type transcriptional regulator TsaR; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas test similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 169.0
  • Bit_score: 230
  • Evalue 1.40e-57
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 169.0
  • Bit_score: 135
  • Evalue 1.60e-29

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Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGAAACTGCAGACCCTGCAAGCGCTGATCGGCATCGAGGAGCTGGGCAGCATCCGCGCCGCCGCCACGCGCATGCACATGTCGCAGCCCGCGCTCACGGCGGCGATCCAGCAGCTCGAGGCGGAACTGCAGGCGCCCTTGCTGGCGCGCAGCAAGCAGGGGGTGAGCTTCACGCGCTTCGGCCAGGCCTTCATGCGGCACGCGCACCTGATCGTGTCGGAGAGCCAGCACGCGCAGGAGGAGATCGCGCAGATGCGCGGCCTGTGGGAGGGGCAGGTGCGCTTCTCCACCTCGCCGGCGATCGCGCTGGCGGTGCTGCCCCAGGCCCTGACCAGCTTCTCGGCCAAGTACCCCGGCGTGGTGCTGTCGGTGCGCGACGGCCTGTACCCCGGCGTCACGCCCGCGCTGCGCGAGGGCACGCTGGACTTCGCGATCACGCCCGCGCATCGGCAGGAGGTGCAGAGCGACATCGTGGCCGAGCCGCTCTACCAGAGCGACATCGTGATC
PROTEIN sequence
Length: 169
MKLQTLQALIGIEELGSIRAAATRMHMSQPALTAAIQQLEAELQAPLLARSKQGVSFTRFGQAFMRHAHLIVSESQHAQEEIAQMRGLWEGQVRFSTSPAIALAVLPQALTSFSAKYPGVVLSVRDGLYPGVTPALREGTLDFAITPAHRQEVQSDIVAEPLYQSDIVI