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scnpilot_p_inoc_scaffold_2553_2

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(1006..1977)

Top 3 Functional Annotations

Value Algorithm Source
Extra-cytoplasmic solute receptor protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIF7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 323.0
  • Bit_score: 611
  • Evalue 6.60e-172
  • rbh
Extra-cytoplasmic solute receptor protein {ECO:0000313|EMBL:EIK88997.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 323.0
  • Bit_score: 611
  • Evalue 9.30e-172
bug; ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 305.0
  • Bit_score: 275
  • Evalue 1.90e-71

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 972
ATGAACAAAACCCTCTGCGGCCTGGTGTGCGCCACCCTGATGGCCTGCGCCCCCTTGTCCTCCCTGGCCCAACAGGCCTGGCCATCCAAGACGGTGAGGATCGTGCTGCCCGGCCCGCCGGCCAGCAGCCCGGACCGCATCACGCGCCTGCTCGCGGAGCGGCTGAGCAAGAAGTGGGGGCAGTCGGTGGTGGTGGACAACAAGCCCGGCGCGTCCACCCGCATCGGCGGGGAAATCGTGGCCCGCGCGGCGCCCGACGGCCACACCCTGCTGTCCACCTTCGTCACCCACTCCACCGTCAAGCTGCTGTACCCCGAAACGCCGTACGACCCGGTCAAGGACTTCGTGGCCATCACCCAGTACGCCACGCCCGAGTCCATCCTGGCCGTGCGCGCCGACTCCCCCTACAAGACGCTGCAGGAACTGGTGGCGGGCATCAAGGCCGCGAAACGGCCGCTGCGCTACGCGCACTTCGGCAATGGCTCCAGCTTCCACGTCTACGGCCTGATCGTTGGCCGCGAGACCGGCATCGAGGTGCTGCCCGTGCCCTACAAAGGCGAGGCGCTGCAGATGAACGACCTGCTGGGCGGCCACGTCGAGTCGAGCTTCAACTCGGTGGGCACCGCGCTGCCGCACATCCGCGCCGGCAAGGTGCGGCCGCTGGGCATCATCACCTCGGAGCGCTCCAAGGTCCTGCCCGACGTGCCCACGTTCAAGGAACTGGGCATCAAGGGCATGGAGCGCGGCGGCTGGTTCGGCTTCCTGGCGCCCGCGGGCACGCCCAAGCCCATCGTCGATCAGATTCAGCGCGACGTGAAGGAGCTGCTGGCCGACCCCGAGATCGCGAAAACCATGCGCGACCAGGGCATCGAACCCGTGGGGTCCACCCCCGAAGAGTTCGGCCAGACGATCCGCGCGGAAGTGGAGCAGTGGGGCAAGCTGCTGACGGAGTTCAATGTCCAGGCCAACTGA
PROTEIN sequence
Length: 324
MNKTLCGLVCATLMACAPLSSLAQQAWPSKTVRIVLPGPPASSPDRITRLLAERLSKKWGQSVVVDNKPGASTRIGGEIVARAAPDGHTLLSTFVTHSTVKLLYPETPYDPVKDFVAITQYATPESILAVRADSPYKTLQELVAGIKAAKRPLRYAHFGNGSSFHVYGLIVGRETGIEVLPVPYKGEALQMNDLLGGHVESSFNSVGTALPHIRAGKVRPLGIITSERSKVLPDVPTFKELGIKGMERGGWFGFLAPAGTPKPIVDQIQRDVKELLADPEIAKTMRDQGIEPVGSTPEEFGQTIRAEVEQWGKLLTEFNVQAN*