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scnpilot_p_inoc_scaffold_2828_1

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 1..888

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000 similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 292.0
  • Bit_score: 561
  • Evalue 7.70e-157
Diaminopimelate epimerase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MK16_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 292.0
  • Bit_score: 561
  • Evalue 5.50e-157
  • rbh
dapF; Diaminopimelate epimerase similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 292.0
  • Bit_score: 419
  • Evalue 7.30e-115

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
TCCATGCGGATCCGCTTCACCAAGATGCAAGGCGCGGGCAACGACTTCGTCGTGCTCGACGAGACGCGCGGACGGCTCGGGCTCAGCACGGCGCAGTACCGCTTTCTCGCCGACCGCCACTTCGGCGTTGGCGCCGACCAAATCCTCTCCGTGCGCGAGGCCCCCGAGCCGGGCCTTGACTTTGAATACGTCATCCACAACGCCGATGGCGGCGAGGTGGAGCACTGCGGCAACGGCGCGCGCTGCTTCGTGCGCTACGTGCACGACAAGGGCCTGAGCGAGCGAAACCCGCTGCGCGTGAAGGTGAAGAACGGCGTGTTGGAACTCAAGCGCCTGCCCGACGGCCGCGTCACCGTGGACATGGGCCCGCCGGTCTTCGCGCTGTCCCAGGTGCCCTTCGACGCCAAGGGCCTGAAGGCCGAGAAGCTCGGCAACTTCGAGCGCTGGCCGCTGGCCGTGCCCTACGCGGGCGACCAGTACGTGGCGGTGCTGTCCATGGGCAACCCGCACGCGGTGCTGCTGGTCGACGACGTCGACACCGCGCCGGTGGCGGCCTGGGGCCCGCTGATCGAAAACCACGAGCGCTTTCCCCGGCGCGTCAACGCCGGCTTTCTGCAGGTGATCGACACCCGCACCGTGAAGCTGCGCGTGTACGAACGCGGTGCGGGCGAAACCCTGGCCTGCGGCACCGGTGCCTGCGCCGCCGTGGTGGCGGGCATCCGCCTGGGCTGGCTGGGCTCGCGCGTGGACGTGCACACCCGTGGCGGCGTGCTCACCATCGAATGGGTCGACACGCCCGAACACGACGCCCCCGTGTTCATGACCGGCCCCGCCACCCCCGTGTTCGAGGGCGAGATCACCGTGCCCGACGAGCTGAACCAACCGTAG
PROTEIN sequence
Length: 296
SMRIRFTKMQGAGNDFVVLDETRGRLGLSTAQYRFLADRHFGVGADQILSVREAPEPGLDFEYVIHNADGGEVEHCGNGARCFVRYVHDKGLSERNPLRVKVKNGVLELKRLPDGRVTVDMGPPVFALSQVPFDAKGLKAEKLGNFERWPLAVPYAGDQYVAVLSMGNPHAVLLVDDVDTAPVAAWGPLIENHERFPRRVNAGFLQVIDTRTVKLRVYERGAGETLACGTGACAAVVAGIRLGWLGSRVDVHTRGGVLTIEWVDTPEHDAPVFMTGPATPVFEGEITVPDELNQP*