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scnpilot_p_inoc_scaffold_3976_6

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(4298..5839)

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000 similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 513.0
  • Bit_score: 970
  • Evalue 1.30e-279
2-isopropylmalate synthase (EC:2.3.3.13) similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 513.0
  • Bit_score: 901
  • Evalue 8.40e-260
2-isopropylmalate synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSB6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 513.0
  • Bit_score: 970
  • Evalue 8.90e-280
  • rbh

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1542
ATGAGCGAACAGCTGATCATTTTCGACACCACCCTGCGCGATGGCGAGCAATCACCCGGCGCGTCCATGACCAAGGACGAGAAGCTGCGCATCGCGCGCCAGCTCGAGCGCCTGAAAGTCGACGTGATCGAGGCCGGCTTTGCGGCCAGCTCCAACGGGGACTTCGAGTCTGTGAAGGCCATCGCTGACCACATCAAAGACTCTACGGTGTGCTCGCTGGCGCGGGCGAACGACCGCGACATCGCGCGCGCGGCCGAGGCGCTCAAGGGCGCCAACCGCGCGCGCATCCACACCTTTATCGCCACCAGCGCGCTGCACATGGAGAAGAAGCTGCGCATGACGCCCGAGCAGGTGCTGGAGCAGGCGAAGCAGTCGGTGCGTTTCGCGCGCAATCTGGTGCAGGACATCGAGTTCAGCCCCGAGGACGGTTATCGCAGCGACGTGGACTTTCTCTGCCGCGTGCTCGAGACCGTGATCAAGGAAGGCGCGACCACGCTCAACATCCCCGATACCGTGGGCTACGCGGTGCCCGAGCTCTATGGCCATTTCATCCGCACCCTGCGCGAGAAGATTCCCAACTCGGACAAGGCGATCTGGAGCGTGCATTGCCACAACGACCTGGGCATGGCCGTGGCCAACTCGCTCGCGGGCGTGAAGATCGGGGGCGCGCGCCAGGTGGAATGCACCATCAACGGCCTGGGCGAGCGCGCGGGCAACTGCTCGCTGGAGGAGATCGTGATGGCGGTGCGCACGCGCCGCGATTACTTCGGCCTCGACGTGGCCATCGACACCACTCAGATCGTGCCCGCCAGTCGCATGGTGAGCCAGACCACCGGCTTCGTGGTGCAGCCCAACAAGGCCGTGGTGGGCGCCAACGCCTTCGCGCACGCCAGCGGCATCCACCAGGACGGCGTGCTCAAGGCGCGCGACACCTACGAGATCATGCGCGCCGAGGACGTGGGTTGGAGCGCCAACAAGATCGTGCTGGGCAAGCTCTCGGGCCGCAACGCCTTCAAGCAGCGCCTGCAGGAGCTGGGCATCGAGATGGCGTCCGAGGCCGAGATCAACACGGCCTTCGCCAAGTTCAAGGAATTGGCCGACCGCAAGGCCGAGATCTTCGACGAGGACATCCTGGCCCTGGCGAGCGACGAGAGCGTCACCGCCGAGAAGGAGCAGTACGGCTTCGTCTCGCTGGCCCAGCGCAGTGAGACCGGCGAGCGTCCGCACGCCAGCGTGGTGTTCACCGTGGATGGCAAGGAACTGCGCGGCGACAGCGACGGCAACGGCCCGGTCGATGCCTCGCTCAAGGCGATCGAGCAGCACGTCAAGAGTGGCGCCGAGTTGCTGCTGTATTCGGTGAACGCCATCACCAGCGGCTCCACCGAAAGTCAGGGCGAGGTCACCGTGCGGCTGCAGCATGGTGGCCGCGTGGTCAACGGCGTGGGCGCGGACCCGGACATCGTGGTCGCGTCGGCCAAGGCCTACCTGAGCGCACTCAACAAACTGCACAGCAAGGCCGACCGGGTGGCGGCACAGGGATAA
PROTEIN sequence
Length: 514
MSEQLIIFDTTLRDGEQSPGASMTKDEKLRIARQLERLKVDVIEAGFAASSNGDFESVKAIADHIKDSTVCSLARANDRDIARAAEALKGANRARIHTFIATSALHMEKKLRMTPEQVLEQAKQSVRFARNLVQDIEFSPEDGYRSDVDFLCRVLETVIKEGATTLNIPDTVGYAVPELYGHFIRTLREKIPNSDKAIWSVHCHNDLGMAVANSLAGVKIGGARQVECTINGLGERAGNCSLEEIVMAVRTRRDYFGLDVAIDTTQIVPASRMVSQTTGFVVQPNKAVVGANAFAHASGIHQDGVLKARDTYEIMRAEDVGWSANKIVLGKLSGRNAFKQRLQELGIEMASEAEINTAFAKFKELADRKAEIFDEDILALASDESVTAEKEQYGFVSLAQRSETGERPHASVVFTVDGKELRGDSDGNGPVDASLKAIEQHVKSGAELLLYSVNAITSGSTESQGEVTVRLQHGGRVVNGVGADPDIVVASAKAYLSALNKLHSKADRVAAQG*