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scnpilot_p_inoc_scaffold_5351_1

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 3..395

Top 3 Functional Annotations

Value Algorithm Source
Type III effector Hrp-dependent outers n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IMG4_METNO similarity UNIREF
DB: UNIREF100
  • Identity: 65.6
  • Coverage: 125.0
  • Bit_score: 165
  • Evalue 3.00e-38
Type III effector Hrp-dependent protein {ECO:0000313|EMBL:EJZ32494.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="B similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 130.0
  • Bit_score: 198
  • Evalue 5.80e-48
type III effector Hrp-dependent protein similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 125.0
  • Bit_score: 165
  • Evalue 8.40e-39

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Taxonomy

Bradyrhizobium sp. CCGE-LA001 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
GAGGCCATCGCGCGGGGCCGCGACCCGCTGGTCTTCACCGCCACCGGCCCCGACGATCCGCGCGTGGCCGCGTTCCGCGAGGCCGTGCGGGCCAGTGGCACGCCGATCGCCGCCGTCAACGACCGGCTCGGCGCCGCGCTCGGCGACATCCTCAACGCCCTGGTGCGCCAGTGCGGCCTGCGGCGCGTTGTCATCTCCGGCGGCGACACCTCCAGCCACGCGGCCTCGCGCCTGGGCATCGACGCGCTGACCGCCATCGCGCCGCTGTCGCCGGGCGTGCCGCTGTGCCGCGCCCATTCGCCCGACCCCGCCATCGACGGCCTGGAGATCGCCCTCAAGGGCGGCCAGACCGGCGCCCCCGACTTTTTCACCGCGGTCAGAGACAAGCACTGA
PROTEIN sequence
Length: 131
EAIARGRDPLVFTATGPDDPRVAAFREAVRASGTPIAAVNDRLGAALGDILNALVRQCGLRRVVISGGDTSSHAASRLGIDALTAIAPLSPGVPLCRAHSPDPAIDGLEIALKGGQTGAPDFFTAVRDKH*