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scnpilot_p_inoc_scaffold_6000_1

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 1..471

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Cupriavidus sp. WS RepID=UPI00036F648B similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 146.0
  • Bit_score: 184
  • Evalue 9.70e-44
FecI-like sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 144.0
  • Bit_score: 176
  • Evalue 4.40e-42
Sigma-24 (FecI-like) {ECO:0000313|EMBL:ABE44836.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 144.0
  • Bit_score: 176
  • Evalue 2.20e-41

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Taxonomy

Polaromonas sp. JS666 → Polaromonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 471
ACCCTGCTCAAGGACGGGCGCGCGCGCCAGACCGTGCCACCCGAGGACCAGCGGCGCCTGCTGAGCGCCTTCGCCGAGGCGGCGTCGCGCGGCGACATCAGCGGCCTGAAGGCCGTGCTGGCCGAGGACGCGCGGCTCGTCAGCGACGGCGGTGGCAAGGTGCCCAGCTTTGGCGTGCCCCTGCTGGGCGGCCAGCGCATCGCGCAGCTCTATCTGGCCACCAGCCTGCGCTTCGCGGGCCGCGTGCACTACGAACTGGCCCCGCTCAACGGCGAATGGGGCCTGCTGCGCTTCATCGACGGCGCGCTGGAATCGGCGCAGGCGCTGCGGATCGAGGACGGCCGCGTCGTGGGCATCCAGGTGCAGCGCAACCCCGACAAGCTGCGGCACATCGCGCAGGCGCTGGGCCACGCGCAGCTGGACCCATCGGTCACAAACTACGTCACAGGAGACGGCGCCGCTTCGTCTTGA
PROTEIN sequence
Length: 157
TLLKDGRARQTVPPEDQRRLLSAFAEAASRGDISGLKAVLAEDARLVSDGGGKVPSFGVPLLGGQRIAQLYLATSLRFAGRVHYELAPLNGEWGLLRFIDGALESAQALRIEDGRVVGIQVQRNPDKLRHIAQALGHAQLDPSVTNYVTGDGAASS*