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scnpilot_p_inoc_scaffold_6000_3

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(993..1883)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Nevskia ramosa RepID=UPI0003B76E45 similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 293.0
  • Bit_score: 323
  • Evalue 2.50e-85
LysR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 285.0
  • Bit_score: 349
  • Evalue 3.60e-93
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 286.0
  • Bit_score: 310
  • Evalue 6.30e-82

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Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGGCCCACCCCCGCGTCACGCTCGATCAATGGAACGCCCTGGTGGCCGTGGTGGAGGCCGGCGGCTACGCGCGCGCGGCCGAGCAACTGAGCCGCAGCCAGTCCTCCGTCACCTACGCGGTGCAGCAGATCCAGGCGCAGCTGGGCGTGCAGGTGTTCGAGCTGGAGGGCCGCAAGGCCCGGCTCACGCCCACCGGTGAGCAGCTCTACCAGCGCGCGCGCTACCTGGTGGCCGAGGCCGCCGCGCTGGAATCGGCCTCGGCCTGCCTGTCGCTGGGCTGGGAAGCCGAGCTGCGGCTGGCGGTGGAGGTGATCTACCCCAACCGGCGCCTGTTCGATTGCCTGGAGCGCTTCGGCCAGAGCGCCGAGCACACGCGCGTCGAGGTGGTGGAGGCCGTGCTCGGCCACCGCAGCTCGCTGCTGGAAGAAGGCGGCATCGACATCGCCATCTACGGCACCGTGCCCACGGGCTACGAGGGCCAGCACCTGATGCGCGTGCGCTTCCTGCTGGTGGCCCACCCGGACCACCCCCTGCACCGCTTGGACCGCGCCGTCACGCTGCGCGACCTGCGGCAGCACCGCCACCTGGTGGTGCGCGAGACCAGCCCGCAGCGCGGCCACGAGCCGGCGGTGCAGACGCCGCGCCGCTGGACGGTGAGCCACATCTCCACCTCCATCGAGGCCGCGCGCGGCGGCCACGGCTTCGCCTGGCTGCCGGAGGAACTGATCCGCCAGGACCTCGACGCGGGCCGGCTCAAGCCCCTGCCCATGCGGCGCGGCGGCGAGCGCTTCGCCGACCTGTACCTGGTGTTCGGCGACCGCGAGGGCGCCGGCCCGGCTGCGCAGCGCCTGGCCGAGATCCTGCTGGCCAACGCGCGCGGGGCCGGTTAA
PROTEIN sequence
Length: 297
MAHPRVTLDQWNALVAVVEAGGYARAAEQLSRSQSSVTYAVQQIQAQLGVQVFELEGRKARLTPTGEQLYQRARYLVAEAAALESASACLSLGWEAELRLAVEVIYPNRRLFDCLERFGQSAEHTRVEVVEAVLGHRSSLLEEGGIDIAIYGTVPTGYEGQHLMRVRFLLVAHPDHPLHRLDRAVTLRDLRQHRHLVVRETSPQRGHEPAVQTPRRWTVSHISTSIEAARGGHGFAWLPEELIRQDLDAGRLKPLPMRRGGERFADLYLVFGDREGAGPAAQRLAEILLANARGAG*