ggKbase home page

scnpilot_p_inoc_scaffold_8222_4

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(3090..3467)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S12 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSI9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 125.0
  • Bit_score: 253
  • Evalue 1.40e-64
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydroge similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 125.0
  • Bit_score: 253
  • Evalue 1.90e-64
rpsL; 30S ribosomal protein S12 similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 125.0
  • Bit_score: 252
  • Evalue 8.60e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
ATGCCAACCATCAACCAACTCGTGCGCCACGGCCGGGAGGTCGAAAAGACCAAATCCAAGAGCCCGGCCATGGAAAACTCGCCGCAACGCCGCGGCGTGTGCACCCGTGTGTACACCACGACCCCGAAGAAGCCGAACTCGGCGCTTCGCAAAGTTGCCAAGGTCCGCCTGACCAACGGCTTCGAGGTCATCTCCTACATCGGCGGTGAAGGCCACAACCTCCAGGAACACAGCGTGGTGCTGGTTCGCGGCGGCCGTGTGAAAGACCTTCCCGGTGTGCGCTACCACATCGTGCGTGGCTCGCTGGACCTGCAGGGCGTGAAAGACCGCAAGCAGGCCCGCTCCAAGTACGGCGCCAAGCGTCCCAAGAAGGCCTGA
PROTEIN sequence
Length: 126
MPTINQLVRHGREVEKTKSKSPAMENSPQRRGVCTRVYTTTPKKPNSALRKVAKVRLTNGFEVISYIGGEGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGSLDLQGVKDRKQARSKYGAKRPKKA*