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scnpilot_p_inoc_scaffold_19561_1

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(3..308)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 99.0
  • Coverage: 102.0
  • Bit_score: 217
  • Evalue 2.50e-54
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=5083764 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 102.0
  • Bit_score: 217
  • Evalue 5.20e-54
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 102.0
  • Bit_score: 217
  • Evalue 7.30e-54

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Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
ATGAAATCCTTGCTCGACCTGTTCAAGCAGTTCACGCCCGACGAGCATTTCGATGCCATCCGCATCGGCCTGGCCTCGCCGGAAAAAATCCGCTCCTGGTCCTTCGGTGAAGTCAAGAAGCCCGAGACCATCAACTACCGCACCTTCAAGCCGGAACGCGACGGCCTGTTCTGCGCCAAGATCTTCGGTCCCATCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTGAAGCACCGTGGCGTGATCTGCGAGAAGTGCGGCGTCGAAGTGACCCAGACCAAGGTGCGCCGCGAGCGCATG
PROTEIN sequence
Length: 102
MKSLLDLFKQFTPDEHFDAIRIGLASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAKIFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERM