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scnpilot_p_inoc_scaffold_19561_2

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(334..2868)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 844.0
  • Bit_score: 1628
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 90.6
  • Coverage: 844.0
  • Bit_score: 1527
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSN9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 844.0
  • Bit_score: 1628
  • Evalue 0.0

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2535
AACCCGCTGGCCGAGATCACGCACAAGCGCCGCGTCTCGGCCCTGGGCCCGGGCGGTCTGACGCGCGAGCGCGCCGGCTTCGAGGTGCGCGACGTGCACGTCACGCACTACGGCCGCGTCTGCCCGATCGAAACGCCGGAAGGCCCGAACATTGGCCTGATCAACTCGCTGGCCCTGTACGCCCGCCTCAACGAGTACGGCTTCATCGAGACGCCGTACCGCCGCGTGGTGGACGGCCAGGTCACGAACCAGATCGACTACCTGTCCGCCATCGAGGAAGGCAAGTACGTCATCGCCCAGGCCAACGCCGCGCTCGACAAGGACGGTCGCCTGGTGGGCGAGCTGGTCTCCGCGCGCGAGAAGGGCGAATCCATCCTGACCGGCCCCGACACCATCCAGTACATGGACGTGTCGCCAGCGCAGATCGTGTCGGTGGCCGCTTCGCTGGTGCCCTTCCTGGAGCACGACGACGCCAACCGCGCGCTGATGGGCGCCAACATGTCTCGTCAGGCCGTGCCCGTGCTGCGCCCCGAGAAGCCCTTCGTGGGCACCGGCATCGAGCGCGTGGCCGCGGTCGACTCCGGCACGGTGGTGACGGCCACCCGCGGTGGCGTGGTCGACTACGTCGACGCCACCCGCATCGTGATCCGCGTCAACGACGAGGAAGCGGTGGCCGGCGAAGTGGGCGTGGACATCTACAACCTCATCAAGTACCAGCGCTCCAACCAGAACACCAACATCCACCAGCGCCCCATCGTCAAGAAGGGCGACAAGCTGGCCAAGGGTGACGTGATCGCGGACGGCGCGTCCACCGACCTCGGCGAAATCTCGATCGGCCAGAACATGCTGATCGCCTTCATGCCCTGGAACGGCTACAACTTCGAGGACTCGATCCTCATCAGCGAACGCGTGGTGGCCGACGACCGCTACACCAGCATCCACATCGAGGAGCTGGTGGTGATGGCGCGCGACACCAAGCTGGGCGCCGAGGAAATCACCCGCGACATCCCGAACCTGGCCGAGCAGCAGCTCAACCGCCTGGACGAGTCCGGCATCATCTACGTGGGCGCCGAAGTGCTGCCCGGCGACGTGCTGGTCGGCAAGGTCACGCCCAAGGGCGAGACCACGCTCACGCCCGAAGAGAAACTGCTGCGCGCGATCTTCGGCGAGAAGGCCTCCGACGTGAAGGACACCTCGCTGCGCGTCGAGCAGGGCTCGCAGGGCACGGTGATCGACGTGCAGGTCTTCACCCGTGAAGGCATCCAGCGCGACAAGCGCGCCCAGCAGATCATCGACGACGAGCTCAAGCGCTTCCGCCTCGACCTCAACGACCAGCTGCGCATCGTCGAGGCCGACGCCTTCGACCGCATCGAAAAGCTGCTGGTGGGCAAGGTCGCCAACGGCGGCCCGAAGAAGCTGGCCAAGGGCACCACCATCGACAAGGCCTACCTGGCCGACGTCGAGAAGTACCACTGGTTCGACATCCGCCCCGCGGACGACAACGTGGCCGCGCAGCTCGAGTCGATCAAGAACTCGATGGAGCAGACGCGCCACAGCTTCGACCTCGCGTTCGAAGAGAAGCGCAAGAAGCTCACGCAGGGCGACGAGCTGCCCGCCGGCGTGCTCAAGATGGTCAAGGTCTACCTGGCCGTCAAGCGCCGCCTGCAGCCCGGCGACAAGATGGCCGGCCGCCACGGCAACAAGGGCGTGGTCTCCAAGATCGTGCCCGTGGAAGACATGCCGCACATGGCCGACGGCACCCCCGCCGACGTGGTGCTCAACCCGCTGGGCGTGCCGTCGCGCATGAACGTGGGCCAGGTGCTGGAAGTGCACCTGGGCTGGGCCGCCAAGGGCCTGGGCCAGCGCATCGGCGACATGCTGCAGCGCGAAGCCAAGGTGGCGGAGGTGCGCCAGACCCTCGAGTCCATCTTCAACACCATGGGCAAGAAGGAAGACTTCGCCGACCTGTCCGACGCCGAGGTCATCGAGATGGCGCAGAACCTGCAGCACGGCGTGCCCTTCGCGTCGCCCGTGTTCGACGGTGCCTCGGAAGACGAGATCCGCGCCATGCTGAAGCTGGCCTACCCGGACGACATCGCCGCGATCAAGGGCCTGACCGAGACGCGCACCCAGGCGCAGCTCTACGACGGCCGCACCGGCGACGCCTTCGAGCGCAAGACCACCGTGGGCTACATGCACTTCCTCAAGCTGCACCACCTGGTCGACGACAAGATGCACGCCCGTTCTACCGGCCCGTACTCGCTCGTCACCCAGCAGCCGCTGGGCGGCAAGGCGCAGTTCGGTGGCCAGCGTTTCGGCGAGATGGAGGTCTGGGCGCTGGAAGCTTACGGCGCGTCCTACATCCTGCAGGAGATGCTCACCGTCAAGTCCGACGACGTGCAGGGCCGCACCAAGGTGTACGAGTCCATCGTCAAGGGCGAGCACACCATCGACGCGGGCATGCCCGAGTCGTTCAACGTGCTGGTCAAAGAGATCCGTTCGCTCGGTATCGATATCGAACTCGAGCGTTCGTGA
PROTEIN sequence
Length: 845
NPLAEITHKRRVSALGPGGLTRERAGFEVRDVHVTHYGRVCPIETPEGPNIGLINSLALYARLNEYGFIETPYRRVVDGQVTNQIDYLSAIEEGKYVIAQANAALDKDGRLVGELVSAREKGESILTGPDTIQYMDVSPAQIVSVAASLVPFLEHDDANRALMGANMSRQAVPVLRPEKPFVGTGIERVAAVDSGTVVTATRGGVVDYVDATRIVIRVNDEEAVAGEVGVDIYNLIKYQRSNQNTNIHQRPIVKKGDKLAKGDVIADGASTDLGEISIGQNMLIAFMPWNGYNFEDSILISERVVADDRYTSIHIEELVVMARDTKLGAEEITRDIPNLAEQQLNRLDESGIIYVGAEVLPGDVLVGKVTPKGETTLTPEEKLLRAIFGEKASDVKDTSLRVEQGSQGTVIDVQVFTREGIQRDKRAQQIIDDELKRFRLDLNDQLRIVEADAFDRIEKLLVGKVANGGPKKLAKGTTIDKAYLADVEKYHWFDIRPADDNVAAQLESIKNSMEQTRHSFDLAFEEKRKKLTQGDELPAGVLKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSKIVPVEDMPHMADGTPADVVLNPLGVPSRMNVGQVLEVHLGWAAKGLGQRIGDMLQREAKVAEVRQTLESIFNTMGKKEDFADLSDAEVIEMAQNLQHGVPFASPVFDGASEDEIRAMLKLAYPDDIAAIKGLTETRTQAQLYDGRTGDAFERKTTVGYMHFLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYILQEMLTVKSDDVQGRTKVYESIVKGEHTIDAGMPESFNVLVKEIRSLGIDIELERS*