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scnpilot_p_inoc_scaffold_21906_4

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 2193..2396

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 67.0
  • Bit_score: 134
  • Evalue 6.90e-29
DNA-directed RNA polymerase subunit omega n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI31_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 67.0
  • Bit_score: 134
  • Evalue 5.00e-29
rpoZ; DNA-directed RNA polymerase omega chain similarity KEGG
DB: KEGG
  • Identity: 97.0
  • Coverage: 66.0
  • Bit_score: 129
  • Evalue 3.40e-28

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGGCACGCATCACCGTCGAAGACTGCCTGGAACAGATCCCCAACCGCTTCCAGCTCGTGCTGGCCGCCACCTACCGCGCCCGCATGCTGAGCCAGGGCCACGCTCCCAAAATCGAGAGCAAGAACAAGCCGGGTGTCACCGCCCTGCGAGAGATCGCCGAAGGCAAGGTCGGCCTCGAGATGCTCAAAAAAGTGCCGACCTGA
PROTEIN sequence
Length: 68
MARITVEDCLEQIPNRFQLVLAATYRARMLSQGHAPKIESKNKPGVTALREIAEGKVGLEMLKKVPT*