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RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3343_3

Organism: Nitrospinae bacterium RIFCSPHIGHO2_02_FULL_39_82

near complete RP 48 / 55 BSCG 49 / 51 ASCG 11 / 38
Location: 1173..2015

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YK99_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 279.0
  • Bit_score: 295
  • Evalue 5.40e-77
RNA polymerase sigma-32 subunit RpoH; K03086 RNA polymerase primary sigma factor Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 280.0
  • Bit_score: 555
  • Evalue 4.00e-155
RNA polymerase sigma-32 subunit RpoH similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 270.0
  • Bit_score: 248
  • Evalue 2.10e-63

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Taxonomy

RLO_Nitrospinae_39_15 → Nitrospinae → Bacteria

Sequences

DNA sequence
Length: 843
ATGACAGCTTATAAAAGAGATAATCAATATGATTTTAATCTGCTGGGGACTTATCTGAAAGATATAGGCGGTATCAAGCCGCTTACAGGAAAAGAAGAAAGGATACTGGCACAGAAGAAGGATGGGGAATCGCTGAATGAACTGATAAGAAGAAATCTTAAGTATGTGATTACTGTTGCAAACAGATATAAAGGGTGCGGTTTGTCTCTGCCTGATTTAATAGGTGAGGGGAATATAGGTTTGATACAGGCAGCGAAGAGATTTGACCACTTAAGAGGGGTAAAGTTTATTACCTATGCTGTCTGGTGGATAAGACAGTCTATGATGCATGCCCTGGCCGAGCACTCAGGGAGTATAAGTCTCCCCCTCAAACAGGCTGGGATATTATATAAAATTAGCAGGAAATACAGGGAGTTTTTTCAGCTTTATAAAAGAGAACCTACTGTGGAAGAGATAGCAAAGGCACTGAATATTTCCATGGGAGAGGTGGAGGCTTTAATGAGGGTATACAGGTCACACTTATCCCTTGACGCCCATTTAAGGGATGGGGATGATACGAGTTACCTTGATATGTTGGAGGATTTTGCAAGGCATCCGATAGAAGAAAATCTTATATATGAGTCTCTCAGAAAAGAAATGGATGCACTTATAAACGAGTTGTCCCCGCGGGAAAAAGAGATATTGAGGATGAGGTTCGGGTTTTATGGCGAATCAATGACCCTTCAGGAGATTGGGGAAAAAATAGGATTATCCAGAGAGAGGGTAAGACAGATAGAGAAGAAGGTAAAGAAAAAATTATTATCAAAGGCAAAGAGAATGGACTTAAAGGATTATCTCCATTGA
PROTEIN sequence
Length: 281
MTAYKRDNQYDFNLLGTYLKDIGGIKPLTGKEERILAQKKDGESLNELIRRNLKYVITVANRYKGCGLSLPDLIGEGNIGLIQAAKRFDHLRGVKFITYAVWWIRQSMMHALAEHSGSISLPLKQAGILYKISRKYREFFQLYKREPTVEEIAKALNISMGEVEALMRVYRSHLSLDAHLRDGDDTSYLDMLEDFARHPIEENLIYESLRKEMDALINELSPREKEILRMRFGFYGESMTLQEIGEKIGLSRERVRQIEKKVKKKLLSKAKRMDLKDYLH*