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RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_10519_8

Organism: Nitrospinae bacterium RIFCSPHIGHO2_02_FULL_39_82

near complete RP 48 / 55 BSCG 49 / 51 ASCG 11 / 38
Location: 5047..6489

Top 3 Functional Annotations

Value Algorithm Source
CzcB family heavy metal efflux protein; K15727 cobalt-zinc-cadmium resistance protein CzcB Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 480.0
  • Bit_score: 933
  • Evalue 9.30e-269
Efflux transporter, RND family, MFP subunit id=1778312 bin=GWB2_Proteobacteria_55_19 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 38.5
  • Coverage: 330.0
  • Bit_score: 217
  • Evalue 2.40e-53
RND family efflux pump membrane fusion protein similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 311.0
  • Bit_score: 186
  • Evalue 2.20e-44

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Taxonomy

RLO_Nitrospinae_39_15 → Nitrospinae → Bacteria

Sequences

DNA sequence
Length: 1443
ATGAAAAAAAATCTTATCTTGATAACAATATCCATGATAGTTGCAGGATTTTTTGTTTGGAGATATTACAGTTCGCCTCCCCAATCAGAGGTTAAGCATGAAGAAGGAAAAAAAGAGGAGGGTATTATAAGGCTCGATGAAGAGGCAATAAAATCTGCTGACATAGTTGTAGAGGAGGCAGGAAAAAGGGAGATTAATAATTATATAACCACCACTGGAGAGGTTAAAGCCAATACTGAAAATGAAGTATATATCACACCGAGGATACCGGGAAAGGTGGTTGAGGTAAAGGCAAGGCTCGGAGATGACGTGAATAATGGAGAGATACTGGCAAGGGTTGACAGCGTGGAAACAGAGGAGATAAGGGCTGGTTTTATAGGGGCTGCTGCCAATTTAAAGGCTGCTGAGGCAAATTTAGAAAAGGAGAGGCTTCTCTATGATAACAAGGCAAAGATAGTAGATATGGTAAAAAAGGGGGTCAAATCAGAAGAGGCAATAAACTTTCTTAAGGATGCCGAATTGGGAAAGGCAAAGGCAGATATTTTAAGACCCCTAACAAGACTGGAATTGGCTGAATCCAATCAGAAAAGGGAGAGGGAGCTTTATCAGGACAATATCTCTTCCATGAAGGAGGTAATTGCAGCAGAAAAGGAATATACAGGTGCAAGGATAGAATTTCAGACGGCAGTAGAAGAGATGTTTCTTAATACAAAACAGGAGATTACAAAGGCTGAGGCAGAATATATGTCTGCAAAGGCAAGAATGGAAGAACGGAGGGAACACTTCTATCACTATGGCTTTTCAGATACAGAGATAGATGAGATGATTGATGAGCCGAGAAAATATGGACATGCCACAATACCAATAATCGCACCCTTTAAAGGAAGGATTGTAGAGAGGCTGGTTACAGTGGGTCAGGTGGTAGATACATCCACTAAACTTTTTAAACTAATAGACCTCTCTACAGTATGGGTATGGGCGAATATATATGAAAAGGATTTAGGCAGGGTAAAGAAGGGGCAGGAGGTTTTAATTACGGTCACCCCATATTCTGATAGAGTCTTTACGGGAAGGATTACCTACCTATCGGATACCCTTGACCCTGCCACAAGGATGATAAAGGTAAGGGCAGAGTTGGAAAATCCTGAAAGGCTCCTTAAGCCAGAGATGTTTGCTACTGTTAAAATAAATGTAGGGCGAGGCTTTAGCCTCGCTATACCTGAATCAGCAATTCAGCGAGAGGGAGAAAATACAATTGTGTTTGTAGCTCTACCCCCCCCTTACAAAGGGGGGGAATTTGAAAAAAGAGTTGTATCCATTGGTACAGAGGTGGATGGCTATCATCAGGTTCTCTCAGGATTAAAAGAAGGGGAGAGGATAGTTACAAAGGGTGCCTTTACACTTAAATCAGAGGGTCTAAAGGGACTGATGGAGGAGGAATAA
PROTEIN sequence
Length: 481
MKKNLILITISMIVAGFFVWRYYSSPPQSEVKHEEGKKEEGIIRLDEEAIKSADIVVEEAGKREINNYITTTGEVKANTENEVYITPRIPGKVVEVKARLGDDVNNGEILARVDSVETEEIRAGFIGAAANLKAAEANLEKERLLYDNKAKIVDMVKKGVKSEEAINFLKDAELGKAKADILRPLTRLELAESNQKRERELYQDNISSMKEVIAAEKEYTGARIEFQTAVEEMFLNTKQEITKAEAEYMSAKARMEERREHFYHYGFSDTEIDEMIDEPRKYGHATIPIIAPFKGRIVERLVTVGQVVDTSTKLFKLIDLSTVWVWANIYEKDLGRVKKGQEVLITVTPYSDRVFTGRITYLSDTLDPATRMIKVRAELENPERLLKPEMFATVKINVGRGFSLAIPESAIQREGENTIVFVALPPPYKGGEFEKRVVSIGTEVDGYHQVLSGLKEGERIVTKGAFTLKSEGLKGLMEEE*