ggKbase home page

RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_10519_9

Organism: Nitrospinae bacterium RIFCSPHIGHO2_02_FULL_39_82

near complete RP 48 / 55 BSCG 49 / 51 ASCG 11 / 38
Location: 6490..9579

Top 3 Functional Annotations

Value Algorithm Source
CzcA family heavy metal efflux protein; K15726 cobalt-zinc-cadmium resistance protein CzcA Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 999.99
  • Bit_score: 1958
  • Evalue 0.0
Heavy metal efflux pump, CzcA family id=2127726 bin=GWB2_CP_45_9 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3 similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 937.0
  • Bit_score: 1156
  • Evalue 0.0
CzcA family heavy metal efflux protein similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 999.99
  • Bit_score: 1107
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Nitrospinae_39_15 → Nitrospinae → Bacteria

Sequences

DNA sequence
Length: 3090
ATGATAGATAAACTGATTTATTTTGCCTTAAGACAGAAGTCTCTAATCATTATAGCTGTTGTTATTCTGATTGCCTTTGGGGTTTATTCCTTTGAAAGACTCCCTATTGACGCATTTCCTGATGTAACAAGTATACAGGTGCAGGTTATCTCAAAGGCACCGGGGATGTCTCCTGTAGAAGTTGAACAGCTTGTTACATTCCCTCTTGAGGTAGAGTTTATGGGACTACCTAAAAAAACGGAACTCCGCTCAGTAACAAAGTTAGGTTTTTCTGTAATTACTGTTGTCTTTGAAGATGGGACTGATATTTATTGGGCCCGTCAGATTGTACTGGAACGGTTGATTCAGGCTAAAGAGAAACTCCCAAAAGGTGCGGAAGTAATACTTGGTCCAATAGCAACAGGTCTGGGAGAGGTTTATCAATATACACTTGAAAAAAGTCACCAGTCACTAGTTACCAGTCACCAGTCAGACCTCATGGAATTCAGGACCCTTCAAGACTGGGTTGTAAGGCCCATGCTCCGCACAGTCCCGGGTGTTGCAGATGTAAACAGCCTCGGAGGCTATCCAAAGCAGTATCAGGTAATGGTTGACCCCAGCCGTCTTAAAAAATACAACCTGACCCTTCGGCAGGTCTTTGAGGCTATTGAAAAGAACAATGCCAATATAGGTGGGGGATATATCCGCCACCAGCAGGAGAGTTATGCAATCCGGGGGCTTGGTCTAATCCAGTCCATGAATGATATTGAGGGGATAGTTGTTTCCTCTATAAAAGGTACTCCTATCTTTTTAAAGGATGTTGCGGATATTCAATTAGGTTCTCGCTACCGTCTGGGCGGTGTAACAGCAAACGGTAAGGGTGAGGCTGTAGAAGGACTTGTCCTCATGCTTATGGGAGGGAACAGCAGGGAGATTGTGTCGGCTGTGAAAGAGAGGGTAAAGGAGGTCAACTGGGTCCTCCCCGAAGGGGTTTCCATTAAGCCTTTCTATGACAGGACAGAGCTTGTAGATCTGGCACTCTCTACCATAGAGAAGGCACTTATGGAAGGGGTTCTCCTTGTGGTCATTGTCCTTTATCTCTTTTTAAGAAACTTTCGCGGGGCGATGGTTGTAGCCATGACCCTACCCCTTGCAGTCCTCTCCACCTTTATTATTATGGGATTCGTAGGGCTGACGGCAAATCTTATGACACTGGGTGGACTCGCCATATCCCTTGGAATGATTGCGGATGCATCAATTATTCAGGTGGAGAATGTCCAGCGGCACCTCTCGGAGAAGGGTATTGAAAAGCACAAACCCATTACGATTCTGGAATCTGTCCTTGAGGTAAGGAAACCGTCACTCTTCGGCGAATTAATAATAGCCATCACCTTCATCCCCCTTATGACACTTGAGGGGATGGAGGGGAAGATGTTCAGCCCCCTCGCATTTACCGTGGTCATTGCCCTTCTCTCATCTCTCATACTTTCCATCTTTGTCATTCCTGTCCTCTGCCTTATCTTTCTGAAGTCTGGCGAGGAAAGGGAAAGTTTTATTGTAAGGGGGGCAATCTATATTTACAGACCGGTTTTAGCATTCGCAATGAAACATAGATGGATAGTCCTCACCATTGCAATATCCCTGTTTATAGGAAGCCTTCTCCTCGTCCCTTTTATAGGAAGGGAATTTGTCCCTGCAATGGATGAAGGCTCTATTGTTATCAATATTCTTAGACTCCCCAGTATAGCCCTTGAAGACTCCCTTGATATAACAACCGTCGTGGAGAGGGAATTGATGAAATTACCAGAAGTAAAAACCGTCGTGACTCGAACAGGGACAGATGAGATTGGAACTGACCCTATGGGTCCTGAGCTTTCCGATGTTTTTATTGCCCTTCAGCCCCGTGAAAAGTGGCGGTTTAAAACAAAGGCAGAGATTCAGGATAGGATGCGTGAGGCGATTGAAAATATCCCCGGTATTGCCTTTATCTTCTCACAGCCTATTCAGATGAGGGTGGATGAATTGGTCTCAGGGGTAAGGGCACAGATTGCAGTAAAGCTCTTTGGAGAGGATATGAAGGTTCTTCAGGAGAAGGCATCACAGATTACGGCTGTTTTAAAAAACATCAGGGGAGTGGCTGACCTTCGGGTCCAACAGATTGCAGGGCAGTATTATCTGGAGATTAAGGCAGACCGCAGGGCTATGGCGCGCTATGGTATCAATATTGCTGATTTGAACGAGGTAGTTGAGATAATCAGGGCGGGGAGGGTGGCTACAGAGGTCATAGAGGGGCAGAGACGATTCGGTATACTTGTAAGACTCCCAGATGAATGGAGTAAAAGCACGGAAGCTATTGGTAATCTCACTGTAAGCGCACCAAATGGTGCCCGCATCCCTCTTAAGGATATTACAGATATCAGGGTTGTAGAGGGGCCATCTAGTATAAACAGAGAGGAAGGACAGCGCAGGATCGTAATAGAGGCAAATGTAGAGGGAAGGGATATTGTAAGCTTTGTTGAGGAGGGGCAGAGGCTGCTCTCCCGGAAGGTTAAACTTCCGGTCGGGTATTATGTATCATGGGGCGGTCAATTTGAAAACCAGCAGAGGGCAATGAAAAGGCTCTCTATTGTAGTTCCCCTCTCTATTACCCTTGTCTTCTTTCTACTTTTTTCAACCTTCAATTCTGCGAGATATGCCACACTCATACTCCTGAATCTCCCTATGGCACTAATTGGTGGGATTGTAGGATTATGGGTTTCGGGACAATATCTAAGTGTCCCTGCATCTGTGGGTTTCATTGCACTTTTTGGAGTGGCTGTCTTAAACGGCATCGTCCTTGTTTCATATATCAATAAACTCAGGGAGGAGGGGCTTGCCCTTGAGGATGCCATAATGATAGGTTGTGAAAAGAGGCTCAGACCCGTGCTTATGACAGCCCTTGTTGCAATCTTAGGACTTACCCCACTCCTCTTTGCTACAGGTCCAGGCTCTGAAGTTCAGAAGCCGCTGGCAACTGTAGTCGTAGGGGGTCTGATAACATCAACACCCTTAACCTTAATCATCCTCCCAATCCTTTACAGGTGGTTTGAGGAGAAGGGGGTGGAGTTTTAG
PROTEIN sequence
Length: 1030
MIDKLIYFALRQKSLIIIAVVILIAFGVYSFERLPIDAFPDVTSIQVQVISKAPGMSPVEVEQLVTFPLEVEFMGLPKKTELRSVTKLGFSVITVVFEDGTDIYWARQIVLERLIQAKEKLPKGAEVILGPIATGLGEVYQYTLEKSHQSLVTSHQSDLMEFRTLQDWVVRPMLRTVPGVADVNSLGGYPKQYQVMVDPSRLKKYNLTLRQVFEAIEKNNANIGGGYIRHQQESYAIRGLGLIQSMNDIEGIVVSSIKGTPIFLKDVADIQLGSRYRLGGVTANGKGEAVEGLVLMLMGGNSREIVSAVKERVKEVNWVLPEGVSIKPFYDRTELVDLALSTIEKALMEGVLLVVIVLYLFLRNFRGAMVVAMTLPLAVLSTFIIMGFVGLTANLMTLGGLAISLGMIADASIIQVENVQRHLSEKGIEKHKPITILESVLEVRKPSLFGELIIAITFIPLMTLEGMEGKMFSPLAFTVVIALLSSLILSIFVIPVLCLIFLKSGEERESFIVRGAIYIYRPVLAFAMKHRWIVLTIAISLFIGSLLLVPFIGREFVPAMDEGSIVINILRLPSIALEDSLDITTVVERELMKLPEVKTVVTRTGTDEIGTDPMGPELSDVFIALQPREKWRFKTKAEIQDRMREAIENIPGIAFIFSQPIQMRVDELVSGVRAQIAVKLFGEDMKVLQEKASQITAVLKNIRGVADLRVQQIAGQYYLEIKADRRAMARYGINIADLNEVVEIIRAGRVATEVIEGQRRFGILVRLPDEWSKSTEAIGNLTVSAPNGARIPLKDITDIRVVEGPSSINREEGQRRIVIEANVEGRDIVSFVEEGQRLLSRKVKLPVGYYVSWGGQFENQQRAMKRLSIVVPLSITLVFFLLFSTFNSARYATLILLNLPMALIGGIVGLWVSGQYLSVPASVGFIALFGVAVLNGIVLVSYINKLREEGLALEDAIMIGCEKRLRPVLMTALVAILGLTPLLFATGPGSEVQKPLATVVVGGLITSTPLTLIILPILYRWFEEKGVEF*