ggKbase home page

RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_50797_10

Organism: Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_02_FULL_39_82

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 9 / 38
Location: comp(9040..9258)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator {ECO:0000313|EMBL:KKW23402.1}; TaxID=1618917 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_51_35.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 72.0
  • Bit_score: 123
  • Evalue 1.00e-25
DNA-binding helix-turn-helix protein id=1705694 bin=GWB2_Elusimicrobium_63_22 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good - similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 73.0
  • Bit_score: 82
  • Evalue 1.40e-13
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 67.0
  • Bit_score: 62
  • Evalue 4.20e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parcubacteria bacterium GW2011_GWC1_51_35 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 219
ATGGGTAGGTCAATAAGAACAAAGGAATATCAGGATTTTGCGTTAAAATTGAAGAATGCCCGCCTAGAGGCAAGTTTAACGCAAGTTGAAGCCGCAAAGAAACTAAAGCGCCCACAGTCATATATTTCAAAGTCAGAGGCGGGCGAACAGAGGTTGGATATTGTGGAGATAAAAAAGTTTGCAGTGCTTTATAATAAAGATATAAATTATTTTTTATAA
PROTEIN sequence
Length: 73
MGRSIRTKEYQDFALKLKNARLEASLTQVEAAKKLKRPQSYISKSEAGEQRLDIVEIKKFAVLYNKDINYFL*