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rifcsphigho2_02_scaffold_25490_4

Organism: candidate division WOR-1 bacterium RIFCSPHIGHO2_02_FULL_45_12

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 2829..3752

Top 3 Functional Annotations

Value Algorithm Source
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 328.0
  • Bit_score: 377
  • Evalue 2.20e-101
Pseudouridine synthase n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R790_9THEO similarity UNIREF
DB: UNIREF100
  • Identity: 55.7
  • Coverage: 300.0
  • Bit_score: 336
  • Evalue 3.00e-89
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 300.0
  • Bit_score: 336
  • Evalue 1.10e-89

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Taxonomy

RIFOXYC2_FULL_WOR_1_41_25_curated → WOR-1 → Bacteria

Sequences

DNA sequence
Length: 924
GTGTTCGAGTATGTCATTGCCCAGGAGGAAGAAGCCAAAAGGCTCGATTCCTTCCTCTCTTTGAAAAAGGAGCTCGGTCTTACCCGCTCGCAGGTTCAGAGGTTTATTGAAGATGGCTTTATTAAGGTTAATAAAGTAGTTGCCAAATCCAGTCATAAACTTAAAACGGATGATCGCGTTGTTATTGAAATACCCCCGCCTAAAAAACTTGAGGTTGATGCCGAAAATATTCCCCTGGACATTGTTTTTGAAGACAAAGATTTGATAGTTATTAATAAGCCACGCAGTCTGGTGGTCCACCCTGCGGTTGGGAATTACTCCGGTACCCTGGTCAATGCTTTATTGGCTCATTGCCATAATCTTTCCGGCATAGGCGGAGTCTTGAGGCCGGGGATTGTTCACCGCCTGGACAAAGATACCTCCGGACTGATTGTGGTGGCGAAAAGTGATTTGGCTCATCAGGCTTTGGCAAATCAATTCAAGGCCAAAGAGATTTTTAAGCAATATTTGGCTTTAGTCCATGGTAAGCTTAAACAAGCGGAAGGAATTATCGAGGCTAATGTGGGGCGGCACCCCAGGCATCGCAAGAGGATGGCGGTTATGGGGGTGGGGGGAAGAGAGGCCATTACACAATATAAGGTTATCAATAGTTTTTCTTTTAAGGAAGAAGATTATTCGCTGGTTGAATTAATCTTAAAAACCGGCCGCACGCACCAGATCAGGATCCATATGAATTCTATCGGACATTCAATCGTTGGTGATCCCGCGTATGGACATAGGCGAGAAGTCTTTAGACTAACCGGGCAGCTGCTGCATTCAGCCAAATTAGGCCTTACTCATCCGCGTACGAAAAAATATATGGAGTTCTCCGCGGATATTCCCGGTGACATGGAGAGGATTCTTAAAATATTACAAAAGAAGTGA
PROTEIN sequence
Length: 308
VFEYVIAQEEEAKRLDSFLSLKKELGLTRSQVQRFIEDGFIKVNKVVAKSSHKLKTDDRVVIEIPPPKKLEVDAENIPLDIVFEDKDLIVINKPRSLVVHPAVGNYSGTLVNALLAHCHNLSGIGGVLRPGIVHRLDKDTSGLIVVAKSDLAHQALANQFKAKEIFKQYLALVHGKLKQAEGIIEANVGRHPRHRKRMAVMGVGGREAITQYKVINSFSFKEEDYSLVELILKTGRTHQIRIHMNSIGHSIVGDPAYGHRREVFRLTGQLLHSAKLGLTHPRTKKYMEFSADIPGDMERILKILQKK*