ggKbase home page

RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_36

Organism: Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_02_FULL_48_21

near complete RP 44 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 8 / 38
Location: comp(36748..37272)

Top 3 Functional Annotations

Value Algorithm Source
putative General secretion pathway protein GspG Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 174.0
  • Bit_score: 367
  • Evalue 9.70e-99
transmembrane_regions 15..37 id=138527 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i similarity UNIREF
DB: UNIREF100
  • Identity: 39.6
  • Coverage: 164.0
  • Bit_score: 96
  • Evalue 3.00e-17
fimbrial protein pilin similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 129.0
  • Bit_score: 87
  • Evalue 5.10e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_SM2F11_48_13 → SM2F11 → Bacteria

Sequences

DNA sequence
Length: 525
ATGACAAATATCTCGCCGGCTAAATATCAAAGGGTGTTTGGCTTTACTTTAATTGAACTTTTGGTAGTAATTGCCATAATCGGGTTCCTCGCGAGCGTGGTTTTGATTAGCCTAAACTCTGCAAGAGCCAAGGCGCGGGATACAAAGCGAAGGGGTGATATTCGATCACTGGTTACAGCACTCGAGCTTTACTATGATGCAAACAGTGCTTACCCCTTTACGGGTAATGGTAGTAGTAGTTGGTGGGGGAACTGTTCAGAGTACGGTAACCGTGGAACTTCTGGTCCGGGTGGCTGGATTCCCAATCTGGCGCCAACGTACGTAGCTCAGCTTCCTTTGGATCCTAAACCTAACGGTGCGGGGGGATGTTATTTGTATACTTCTGACGGGATGAATTATAAACTCCTTGCACACCAAACCACGGAAAGTGTTTGCCCGGTGCCATCCACTGATCCATATTGGGATGCTCCTCGAAACGGACAATGTACATTTTCTCGATACAGCCCAGGTGCTGCAGCTTGGTAA
PROTEIN sequence
Length: 175
MTNISPAKYQRVFGFTLIELLVVIAIIGFLASVVLISLNSARAKARDTKRRGDIRSLVTALELYYDANSAYPFTGNGSSSWWGNCSEYGNRGTSGPGGWIPNLAPTYVAQLPLDPKPNGAGGCYLYTSDGMNYKLLAHQTTESVCPVPSTDPYWDAPRNGQCTFSRYSPGAAAW*