ggKbase home page

RIFCSPHIGHO2_12_Acinetobacter_41_5_rifcsphigho2_12_sub10_scaffold_3682_3

Organism: Acinetobacter sp. RIFCSPHIGHO2_12_41_5

near complete RP 44 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(2246..3484)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SEI4_ACIJO similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 412.0
  • Bit_score: 793
  • Evalue 1.20e-226
Transcription-repair coupling factor (superfamily II helicase) Tax=RIFCSPHIGHO2_12_FULL_Pseudomonadales_40_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 412.0
  • Bit_score: 798
  • Evalue 4.00e-228
transcription-repair coupling factor Mfd similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 412.0
  • Bit_score: 745
  • Evalue 1.10e-212

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_Pseudomonadales_40_16 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1239
GTACGCGATAAAGAGCGGATTAAAGCCATGCGTGCAGATGTAGATATGTTGACTCTGACCGCAACTCCAATTCCACGGACTCTAAACATGGCCTTTAGTGGTATGCGTGATCTATCCATTATTGCCACACCACCTGCACGACGTTTAGCGGTAAAAACTTTTGTGCAAGAACATACGGGTGATTCAGTTAAAGAAGCCATCTTGCGTGAGTTACTGCGTGGCGGGCAAGTTTATTTCCTACATAATGAAGTCGAAACTATTGAACGTGCAGCGGAAAGCCTTCGAGAGTTGGTCCCTGAGGCACGTGTAGCTGTTGCACATGGTCAAATGCGTGAACGCGAGTTAGAACAAGTCATGCAGCAGTTTTACCATAAAGAATATAACGTGCTGGTCTGCTCAACCATTATTGAAACAGGGATTGATGTTCCGAATGCCAATACCATTTTAATTGAACGGGCAGATAAGCTGGGTTTGGCGCAGTTGCATCAACTCCGTGGGCGTGTAGGGCGCTCGCATCACCAAGCTTATGCCTATCTGTTGGTGCCATCCATCAAAGGGTTGAAAGGTGATGCTGAAAAACGTCTAGATGCGATTCAGCGGGCATCGACATTAGGTGCGGGTTTTATGATGGCCACGGAAGACTTAGAAATTCGTGGAGCGGGTGAGTTACTCGGCGAGCAACAAAGTGGATCCATGCAAGCCATTGGCTATAGCTTGTATATGGAGATGCTCGAAAAGGCGACCAAAGCCATTCAAAAAGGCAAAACCCCGAACTTCGATGCGCCACTCTCACTGACCGCAGAAATCAATTTACATATGCCGGCTTTGATTCCAGATGAATATCTGGGAGATGTCCATCAGCGTTTATTGTTCTATAAGCGCATTAGTAATACGGACAGTCAGGAAAAACTCGATAACATTCGTATGGAGTTGATTGACCGTTTTGGGATACCACCACAACCTGTGAAGCAGCTTTTTGCTGTGCATCAGATGCGTTCGAAAGCAGAAACACTGGGCATTACCAAAGTGGATATTTCTGCCAATGGTGGTACGATTGAATTTTCACCAGAGACTCCTGTTCAGGCAATTAGTATTATTCAGATGATGCAAAAACACCCGACCTTTTTTAGGATGGAAGGTGGTCAGCGCTTAAAGGTCATGGTCATACTAGAGGAATATGAAAAACGGATTCAATTTATCAATGACTTATTGGAAAGTTTGTTGAAAGAGTTGCATTAA
PROTEIN sequence
Length: 413
VRDKERIKAMRADVDMLTLTATPIPRTLNMAFSGMRDLSIIATPPARRLAVKTFVQEHTGDSVKEAILRELLRGGQVYFLHNEVETIERAAESLRELVPEARVAVAHGQMRERELEQVMQQFYHKEYNVLVCSTIIETGIDVPNANTILIERADKLGLAQLHQLRGRVGRSHHQAYAYLLVPSIKGLKGDAEKRLDAIQRASTLGAGFMMATEDLEIRGAGELLGEQQSGSMQAIGYSLYMEMLEKATKAIQKGKTPNFDAPLSLTAEINLHMPALIPDEYLGDVHQRLLFYKRISNTDSQEKLDNIRMELIDRFGIPPQPVKQLFAVHQMRSKAETLGITKVDISANGGTIEFSPETPVQAISIIQMMQKHPTFFRMEGGQRLKVMVILEEYEKRIQFINDLLESLLKELH*