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RIFCSPHIGHO2_12_Acinetobacter_41_5_rifcsphigho2_12_sub10_scaffold_12021_1

Organism: Acinetobacter sp. RIFCSPHIGHO2_12_41_5

near complete RP 44 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(48..917)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=2 Tax=Acinetobacter johnsonii RepID=D0SC91_ACIJO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 289.0
  • Bit_score: 568
  • Evalue 3.40e-159
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=575586 species="Bacteria; Proteobacteria; Gammaproteobacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 289.0
  • Bit_score: 568
  • Evalue 4.70e-159
rpoH; RNA polymerase factor sigma-32 similarity KEGG
DB: KEGG
  • Identity: 95.2
  • Coverage: 289.0
  • Bit_score: 540
  • Evalue 2.10e-151

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Taxonomy

Acinetobacter johnsonii → Acinetobacter → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGAGTGACAGCAGCAATCAATTGATGCCCCTGTCATTATCGGCACCAGGTGTAAACTTGGGCGCTTATATTAGTACTGTCAACCAAATCCCGATTTTGACAGCGGAACAAGAAAAAGAGCTAGCTGAACGCTACTATTATGACCAAGACCTCGATGCCGCTAAACTTCTAGTCATGTCGCATCTGCGTTTTGTTGTTCATATTGCCCGCAGTTATGCAGGCTACGGCTTACCTCAAGGTGACCTCATTCAAGAAGGTAACTTGGGCTTAATGAAAGCTGTTAAACGCTTCGACCCAAACATGGGCGTACGCTTGGTCTCTTTTGCGGTACACTGGATTAAAGCCGAAATTCACGAATATGTGATTCGTAACTGGCGTATTGTCAAAATTGCGACGACTAAAGCACAGCGTAAACTGTTCTTTAATTTACGTAGTCTAAAAAAATCGTCTAAAAAGCTCACTCTAAAAGAAGCGCAATCGATTGCAAATGACCTCAATGTGACACCTGAACAGGTGTTAGAAATGGAAGGTCGTTTAACTGCTTATGATGCAGCGTTTGAAGCTCAGGGCGATGATGACGATGAAGGTTCAACCCATGTTGCACCTGCGCTCTATCTTGAAGATAACCGCTACGACCCTGCACGTTTGGCTGAAGAAGAAGATTACGAAGAACAGAGCACCAATGCTTTGCATGATGCGATGGAACAACTTGATGACCGTTCGCGTAATATTTTACAGCGCCGTTGGTTAGATGATGAAAAATCGACACTGCACGAACTGGCTGCTGAATATAATGTTTCGGCAGAACGCATTCGTCAGCTTGAAAAAAATGCCATGGAAAAAATTAAAGTGGCAATGTCATCGAACTAA
PROTEIN sequence
Length: 290
MSDSSNQLMPLSLSAPGVNLGAYISTVNQIPILTAEQEKELAERYYYDQDLDAAKLLVMSHLRFVVHIARSYAGYGLPQGDLIQEGNLGLMKAVKRFDPNMGVRLVSFAVHWIKAEIHEYVIRNWRIVKIATTKAQRKLFFNLRSLKKSSKKLTLKEAQSIANDLNVTPEQVLEMEGRLTAYDAAFEAQGDDDDEGSTHVAPALYLEDNRYDPARLAEEEDYEEQSTNALHDAMEQLDDRSRNILQRRWLDDEKSTLHELAAEYNVSAERIRQLEKNAMEKIKVAMSSN*