ggKbase home page

RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_1550_21

Organism: Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_42_100

near complete RP 46 / 55 BSCG 48 / 51 ASCG 11 / 38
Location: comp(16740..17201)

Top 3 Functional Annotations

Value Algorithm Source
Integrase id=2719616 bin=GWC2_Alphaproteobacteria_42_16 species=Octadecabacter arcticus genus=Octadecabacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 154.0
  • Bit_score: 311
  • Evalue 4.00e-82
putative integrase Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 153.0
  • Bit_score: 311
  • Evalue 5.50e-82
putative integrase similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 147.0
  • Bit_score: 168
  • Evalue 1.20e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Alphaproteobacteria_42_30 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGCGATGGGATGAGGTCAATTTTACTCTTTCAGAATGGCATATTAAAGAAACAAAAAATGGAGAATCTCATGTTATCCCCCTAACAACTCCTGCTATTGATATTCTAAAAGAAAGGAAGATTCATTCTCAGGGTTCTTATGTTTTTCCAGGGGAAGGGAAAAGTGGTTACTTATCTGATCCTAAAAAAGCTTGGAGTCGGGTTTTACAGAGAGCGGAAATTGCTGACTTACGTATTCATGACCTTCGTCGTACATTGGGAAGTTGGATGGCTGCCATGGGGGCAACAACAGCCATTATTGGCAAAACTCTTGCCCATAAAAGTGTAGAGGCCACAAAGGTCTATGAACGCATTGACATTGATCCCGTGAGAGAATTTATAACGCTCGCTAATGACGCTATTTTTAAATTTGGTTATGCAGAGGAAAGTAGCGGTGAAAACAAAAGTTTTGATGCAAATTAG
PROTEIN sequence
Length: 154
MRWDEVNFTLSEWHIKETKNGESHVIPLTTPAIDILKERKIHSQGSYVFPGEGKSGYLSDPKKAWSRVLQRAEIADLRIHDLRRTLGSWMAAMGATTAIIGKTLAHKSVEATKVYERIDIDPVREFITLANDAIFKFGYAEESSGENKSFDAN*