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RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_4981_9

Organism: Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_42_100

near complete RP 46 / 55 BSCG 48 / 51 ASCG 11 / 38
Location: comp(8875..13047)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2731
  • Evalue 0.0
rpoB; RNA polymerase, beta subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 73.2
  • Coverage: 999.99
  • Bit_score: 2043
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta id=4429538 bin=GWC2_Alphaproteobacteria_42_16 species=Magnetospirillum gryphiswaldense genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2731
  • Evalue 0.0

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Taxonomy

R_Alphaproteobacteria_42_30 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4173
ATGGCTAGAACCTATACGGAACGTAAGAGAATTCGCAAAAGTTTTGCGAGGATTCCTGAAATCGCTCCTTTGCCTAACCTAATCGAACTGCAAAAAACGTCCTATGCAAATTTTTTACAAATGGACATTCCAGCTGAAGAGCGTAGATCGACGGGGTTGCAAGAAGTTTTTCAATCCGTATTTCCTATCTCTGATTTTTCAGGGAAATCTCAACTCGAATTTTATCGCTATGATTTTGATGCTCCTAAATATGACGTAGATGAATGTAGGCAACGTGGCATGACCTATGCAGCGCCTTTGCGCGTCACCTTCCGTCTTGTGGTTTGGGATATTGATGAGGATGCTGGGTCAAAAACCATTCGAGACATTAAGGAACAAGATGTATACATGGGTGATATCCCTTTGATGACAGAGAATGGAACCTTCGTTGTCAATGGCATTGAGCGTGTGGTTGTTTCCCAAATGCACCGCTCCCCTGGTGTTTTCTTTGATCATGATAGTGGAAAGTCCCATGCTTCAGGAAAGTATCTTTTTTCCGCACGCGTGATTCCTTACCGTGGGTCTTGGCTTGACTTTGAATTTGATGCCAAAGACATTGTTTACGCTCGTATTGATCGGAAGCGTAAAATTCCGGTGACCACCTTCTTAATGGCCCTGGATAGCGCTGAAACAGAAAAAGAGCGAGCCCGACTTGTTAAAGAGGGCAAACAACTGGATCATCTTGAGACGCAAGGGATGTCCCGCGAGGAAATCCTCAATACTTTTTATACAACCCTTGAGTATACGAAAACGGGTAAAGGATGGAAAACTGCATTTCGCCCTGACACAGTGAAGGTCGGAAAACTTGCCTATGATTTAGTCAATGCGAATACAGGAAAAGTTGTAGCCGCAGAGGGGGCGAAGATGAATTCGCGTTTTGCGCAAAAGCTTCAAGAGGAGGGTTTAAAGGATATTCTTGTTCTTGAAGATGACCTTATTGGTCGTTACATCGCTTTAGATCTTATTAATGAAAAGACAGGCGAAATCTATGCAGAGGCTGGCGATGAGATCACACCTCAACTATTAGAAGCCTTTGCAAAGGAAAAGATTAAAAAGATCCCAACATTAGATATCGACCATGTCAACGTTGGTGCTTATCTCCGTAATACCTTAATGGCAGATAAGAACCAATCCCGCGAAGATGCCCTAATTGAAATTTATCGCATCTTGCGCCCTGGTGAACCACCGACAGTTGAAGGTGCTGAGGCTCTTTTCCAAGGATTCTTCTTTGATCGAGAAAGATATGATTTGTCCTCCGTGGGACGCGTTAAGATGAATTCCCGTCTTGGTCTTGATTTGCCTGATACACTTCGTGTTTTGTGTAAGCAAGATATCCTTGCTATTGTAAAAGTTCTTCTCGAGTTAAAAGATGGGAATGGCGACATCGATGACATTGATAACCTTGCAAATCGTCGTGTAAGATCTGTTGGAGAGCTCTTAGAAAATCAATACCGCATTGGGTTGTCTCGCATGGAACGGGCAATCCGTGAAAGGATGAGCTCCGTCGAAATTGACACCGTCATGCCACATGACGTTATCAATGCCAAGCCAGCGGCTGCGGTTGTGCGTGAATTTTTTGGAACATCTCAATTGTCCCAATTTATGGATCAAACAAATCCATTATCTGAGATCAATCACAAGCGCCGTTTGTCAGCCCTTGGACCAGGAGGTTTGACGCGCGATCGCGCAACCTTTGAGGTGCGCGACGTGCACCCAACACACTATGGACGTATTTGTCCGATTGAAACTCCAGAAGGTCCAAATATTGGTTTGATTAACTCTTTGGCGACCTATGCGCGTGTGAATAAATATGGGTTTATTGAAACCCCCTACCGTAAGGTCATAGATGGAAAAGTTACAAAAGAGATTACTTATTTTACAGCTATGGAAGAAAACAAGCACACTATTGCTCAGGCGAACGCTGAGTTGGACAAAAATGGATGCTTTATAGCTGACTTTGTAAGCTGTCGCCGGAATGCTGAATTCGTAGTAGCTCCTGCAGCTGAGATTGACTTAATGGACATTTCTCCAAAACAAATCGTCTCTGTTGCGGCTTCGCTCATTCCCTTTATTGAAAATGATGATGCGAACCGTGCGTTGATGGGCTCCAACATGCAGCGTCAAGCTGTGCCCTTATTGAAGACAGACGCTCCATTTGTGGGAACTGGCATGGAAGCTCCAGTGGCTCGCGACTCAGGGGTTGCAGTTATTGCAAAACGGACAGGAGTTGTGGATCAAGCTGATGCCTCACGTATCGTGATTCGTGTGACAGATGAAACCGCGATGACAACAAGCAATGTTGATATTTATAATCTCTTAAAGTTCCAGCGTTCAAATGATAAAACCTGTATCAACCAAAAGCCTCTTGTAAAGGTTGGTGATAGGGTTGAAAAAGGGGACATCATTGCGGATGGTCCTTGCATGAATCTGGGAGAGCTTGCTTTGGGATCGAACGCTCTTGTAGCCTTTGTGTCTTGGAATGGGTATAATTTTGAAGACTCCATTATTATTTCTGAGCGAATTGTGAAGGATGATATTTTTACCTCAATTCACATTGAGGAATTTGAAGTGGATGCCCGAGATACAAAGCTTGGCAATGAGGATATTACTCGGGATATTCCCAATGTTGGTGATGAAGCTCTCCGCCATTTAGACGAGGCAGGCATTGTTTATATTGGGGCTGACGTAAAGCCCGGTGATATCCTTGTGGGCAAGGTCACACCAAAAGGCGAATCCCCATCAACCCCAGAAGAAAAACTTTTACGTGCCATTTTTGGTGAGAAAGCTTCAGATGTTCGTGATACTTCCCTTAAATTGCCTCCAGGCGTCCAAGGCACCATCGTTGAGGTGAGAGTTTTCTCTCGCCGCGGGGTTGAGAAAGACGAACGTGCTTTGGCGATTGAGCGCGCTGAAATTGAGAGCTATGCGAAGGATCGAGATGCTGAGCGGTCAATTTTGGATCGTAACTTTTTTGCGGCCCTTGAGGATCTTTTAACTGGTCAAAAGCTTGTGAGTGGTCCAACCGGCCTTAAAAAGGGAACGAAGATCACGAAAGCTATTTTGGATTCCTTGTCTAAAGGACAATGGCGCCAGATCAAGGTTCAAGACGACGCTGTTATGTCGGCTCTTGAAGCCACAAAACAATATCATGATGAGCGGGTCACAGCTTTACAAGTCCGTTTTGAAGACAGGGTGGAAAAACTTCGTCGAGGGGACGAATTGCCCACTGGGGTTTTGAAAAAGGTCAAGGTTTTCGTTGCCGTGAAACGTAAGCTCCAACCTGGAGATAAAATGGCAGGTCGCCATGGAAATAAGGGTGTGGTCTCACGCATTGTTCCTGTTGAGGACATGCCTTATCTTGAAGATGGAACGCCTGTCGACATCGTCTTGAATCCTCTTGGTTTGCCATCGCGTATGAATGTGGGACAAATCCTTGAAACCCACTTGGGTTGGGCAGCTGCTGGTTTGGGACGCCAAATTAATGATGCTCTCTCAAAGATGGCAATTGAAGAGCACAAGGATATCAAAGTTCTTCGCGCGACCTTAGATCAAGTCTATGAAGATAGGGACGTTGTTAAGGAAATCAAAGATATGTCTGATTATGAGGTTGTCGAGCTTGCAACAAACCTCTCCTCAGCAGTTCCAATGGCAACGCCCGTTTTTGATGGAGCTCATGAAGTTGATATCAACCATCAATTAAAAAAGGCAAACCTCGATACGAGTGGTCAAGTTACCCTGTACGATGGCCGCACCGGCGAGCCTTTTGATCGCAAGGTAACTGTAGGTTACATGTATATGCTGAAGCTGCACCACCTTGTGGATGATAAGATCCATGCGCGGTCTGTAGGCCCATATAGCTTAGTTACCCAGCAACCGCTGGGAGGAAAAGCTCAGTTTGGTGGTCAACGTTTTGGAGAAATGGAAGTCTGGGCGCTTGAAGCTTATGGCGCGTCTTATACCCTTCAAGAAATGTTGACGGTGAAATCAGATGACGTTTCTGGACGAACAAAGGTTTATGAATCCATTGTTCGTGGGGATGATAATTTTGAATCCGGTATTCCCGAATCCTTTAATGTCTTGATCAAAGAGTTACGATCATTGGGTTTGAACGTTGAACTTGGAATGGAAGAATAG
PROTEIN sequence
Length: 1391
MARTYTERKRIRKSFARIPEIAPLPNLIELQKTSYANFLQMDIPAEERRSTGLQEVFQSVFPISDFSGKSQLEFYRYDFDAPKYDVDECRQRGMTYAAPLRVTFRLVVWDIDEDAGSKTIRDIKEQDVYMGDIPLMTENGTFVVNGIERVVVSQMHRSPGVFFDHDSGKSHASGKYLFSARVIPYRGSWLDFEFDAKDIVYARIDRKRKIPVTTFLMALDSAETEKERARLVKEGKQLDHLETQGMSREEILNTFYTTLEYTKTGKGWKTAFRPDTVKVGKLAYDLVNANTGKVVAAEGAKMNSRFAQKLQEEGLKDILVLEDDLIGRYIALDLINEKTGEIYAEAGDEITPQLLEAFAKEKIKKIPTLDIDHVNVGAYLRNTLMADKNQSREDALIEIYRILRPGEPPTVEGAEALFQGFFFDRERYDLSSVGRVKMNSRLGLDLPDTLRVLCKQDILAIVKVLLELKDGNGDIDDIDNLANRRVRSVGELLENQYRIGLSRMERAIRERMSSVEIDTVMPHDVINAKPAAAVVREFFGTSQLSQFMDQTNPLSEINHKRRLSALGPGGLTRDRATFEVRDVHPTHYGRICPIETPEGPNIGLINSLATYARVNKYGFIETPYRKVIDGKVTKEITYFTAMEENKHTIAQANAELDKNGCFIADFVSCRRNAEFVVAPAAEIDLMDISPKQIVSVAASLIPFIENDDANRALMGSNMQRQAVPLLKTDAPFVGTGMEAPVARDSGVAVIAKRTGVVDQADASRIVIRVTDETAMTTSNVDIYNLLKFQRSNDKTCINQKPLVKVGDRVEKGDIIADGPCMNLGELALGSNALVAFVSWNGYNFEDSIIISERIVKDDIFTSIHIEEFEVDARDTKLGNEDITRDIPNVGDEALRHLDEAGIVYIGADVKPGDILVGKVTPKGESPSTPEEKLLRAIFGEKASDVRDTSLKLPPGVQGTIVEVRVFSRRGVEKDERALAIERAEIESYAKDRDAERSILDRNFFAALEDLLTGQKLVSGPTGLKKGTKITKAILDSLSKGQWRQIKVQDDAVMSALEATKQYHDERVTALQVRFEDRVEKLRRGDELPTGVLKKVKVFVAVKRKLQPGDKMAGRHGNKGVVSRIVPVEDMPYLEDGTPVDIVLNPLGLPSRMNVGQILETHLGWAAAGLGRQINDALSKMAIEEHKDIKVLRATLDQVYEDRDVVKEIKDMSDYEVVELATNLSSAVPMATPVFDGAHEVDINHQLKKANLDTSGQVTLYDGRTGEPFDRKVTVGYMYMLKLHHLVDDKIHARSVGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYTLQEMLTVKSDDVSGRTKVYESIVRGDDNFESGIPESFNVLIKELRSLGLNVELGMEE*