ggKbase home page

RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_6367_8

Organism: Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_42_100

near complete RP 46 / 55 BSCG 48 / 51 ASCG 11 / 38
Location: comp(9947..10558)

Top 3 Functional Annotations

Value Algorithm Source
Transposase, IS4 id=4649251 bin=GWC2_Alphaproteobacteria_42_16 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 204.0
  • Bit_score: 408
  • Evalue 3.20e-111
transposase Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 203.0
  • Bit_score: 408
  • Evalue 5.80e-111
transposase similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 196.0
  • Bit_score: 175
  • Evalue 2.20e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Alphaproteobacteria_42_30 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
GTGAGTTACAGTGCAAATCGTGCCAAGAAAGGTGTATCTGACAGACAGAGACTTCTCGATAAACTTCAAAAAAGACTCGGGGAGAAGAAAACGCTCAAGAGCTTGGTTTCAAATCGAGGATATCTCAAATATATTCAAGAAGATGGAAAAACAGTTTGTCAATTAAATGAGACGAAGATCGAACAAGAAGAGCTATGGGATGGCATGCATGGCATTGTGACCAATGCCCCAAAGACAGAACAAGCTTTAACTCTCCTTTATCGTTATCGCCGGTTGTGGGTGATTGAGGAATCCTTCCGTATCAACAAGTATACACTGAGAATGCGTCCTATTTACCATTTTATGGACTGGAGGGTCAAAGCTCACATTGCACTATGCTACATGGCTTTTGCTCTCACAAGGCATCTTGAGTATCGTGTTAAGATTGCTCAAACAAAACTGAGTCCTCAAGAAATCCTCAGCGCCCTCAATAGCGTCCAAGCCAGCATCCTCAAACACAAGAAGACGGGCGATCGGTACCGTATGCCCTCACCCCTCAAAAAAGAGGCTCGGATGATTTACCAAACGTTTGGTGTTAAAAGAAGTCAGGATGTTGAGATTTACCTTCCTTAG
PROTEIN sequence
Length: 204
VSYSANRAKKGVSDRQRLLDKLQKRLGEKKTLKSLVSNRGYLKYIQEDGKTVCQLNETKIEQEELWDGMHGIVTNAPKTEQALTLLYRYRRLWVIEESFRINKYTLRMRPIYHFMDWRVKAHIALCYMAFALTRHLEYRVKIAQTKLSPQEILSALNSVQASILKHKKTGDRYRMPSPLKKEARMIYQTFGVKRSQDVEIYLP*