ggKbase home page

RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_2648_17

Organism: Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_42_100

near complete RP 46 / 55 BSCG 48 / 51 ASCG 11 / 38
Location: 19982..20449

Top 3 Functional Annotations

Value Algorithm Source
Probable rRNA maturation factor id=3827316 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Pseudovibrio taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 156.0
  • Bit_score: 309
  • Evalue 1.50e-81
hypothetical protein; K07042 probable rRNA maturation factor Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 155.0
  • Bit_score: 309
  • Evalue 2.10e-81
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 167.0
  • Bit_score: 129
  • Evalue 7.90e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Alphaproteobacteria_42_30 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 468
ATGAGCATAAAAAGTCCTCACATTAATTTCATTTTTTCGACCTCGAAGTGGAAAGTCATCGCTCCTCTTTTAAAGAATGAAATTGCCTTTGCTCTTGAGAAAACAACCGAAGCTCTCAACTCTGACTTTTCTCAAAAGGAAGTAAGTCTTGTTCTAACTTCAGATACGGAAGTGCAGAGCCTGAATAAAACCTATCGTCACAAAGATAAACCTACGAATGTTCTCTCCTTTCCTTCTGAGCAAAAAGATGAGGTGGGGGATATTGTTTTAGCCTATGAAACTGTGATGAAAGAGGCCGATGAGTTAGGCATTTCCCCCCTTCATCATACCCTTCATTTGATTGTCCATGGCTTTTTGCATCTTTTAGGGTATGATCATGAAAATAAAGTTGATGCTGAAAAAATGGAAACTTTGGAAATTGAGATCTTAAAAGCCTTAAATATTCGAAACCCTTATGAGGACTCATGA
PROTEIN sequence
Length: 156
MSIKSPHINFIFSTSKWKVIAPLLKNEIAFALEKTTEALNSDFSQKEVSLVLTSDTEVQSLNKTYRHKDKPTNVLSFPSEQKDEVGDIVLAYETVMKEADELGISPLHHTLHLIVHGFLHLLGYDHENKVDAEKMETLEIEILKALNIRNPYEDS*