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RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_2926_4

Organism: Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_42_100

near complete RP 46 / 55 BSCG 48 / 51 ASCG 11 / 38
Location: 1836..2231

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega id=3959827 bin=GWC2_Alphaproteobacteria_42_16 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 132.0
  • Bit_score: 255
  • Evalue 2.20e-65
rpoZ2; RNA polymerase subunit omega Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 131.0
  • Bit_score: 255
  • Evalue 3.10e-65
rpoZ2; RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 129.0
  • Bit_score: 138
  • Evalue 1.90e-30

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Taxonomy

R_Alphaproteobacteria_42_30 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
ATGGCTCGTGTCACAGTTGAAGATTGCATTCGTGAAGTTCCTAACCGGTTTGATCTGGTTTTGCTCGCCTCTCAACGCGCACGGCAAGTTTCAGCGGGTTCACCCCTAACGGTTTCTCGTGATAATGATAAAAACCCTGTTGTGGCTTTACGCGAGATTGCAGATAAAACCGTTAACTTAGAAGAGCTTCAAGAAAATCTAATTCAAGGGCTTCAAAAATATATTCCTGGTGAAGAGCCAGAAGAAGAATACATAGAACTTTTATCAGAAGAACAATCTTATGCAGGTGAAGGCCAACATCAAACTGAAATCGAAAGCCTTGCTCTTGACGATGAGATAAGCGATGATGAAGAAGATATTGAAATTGACTTAGAAAGCACAGAGGAAGAAGAATAA
PROTEIN sequence
Length: 132
MARVTVEDCIREVPNRFDLVLLASQRARQVSAGSPLTVSRDNDKNPVVALREIADKTVNLEELQENLIQGLQKYIPGEEPEEEYIELLSEEQSYAGEGQHQTEIESLALDDEISDDEEDIEIDLESTEEEE*