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RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_1536_19

Organism: Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_42_100

near complete RP 46 / 55 BSCG 48 / 51 ASCG 11 / 38
Location: 18708..20783

Top 3 Functional Annotations

Value Algorithm Source
Predicted site-specific recombinase id=2744558 bin=GWC2_Alphaproteobacteria_42_16 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 692.0
  • Bit_score: 1370
  • Evalue 0.0
pinR; site-specific recombinase Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 691.0
  • Bit_score: 1370
  • Evalue 0.0
pinR; site-specific recombinase similarity KEGG
DB: KEGG
  • Identity: 62.8
  • Coverage: 690.0
  • Bit_score: 854
  • Evalue 1.60e-245

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Taxonomy

R_Alphaproteobacteria_42_30 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2076
ATGCCCATTGATTCTTCTCATAAAATTACTGAACAACATACCAATCGAGATGCTTTTTTATATGTACGACAATCCTCTTTACGCCAGGTAATTGAAAATACCGAGAGTACCAAACGACAATATGCTTTACGCGAGCGCGCAATTGCCCTTGGTTGGCCAATTGAGCGTATCCATACTATTGATAGTGATCTAGGCAAATCAGGAGCGGAGTCAGTTAATCGCGATGGATTTCAGCAATTAGTCACAGAAGTGGCTCTTGGAAATGCCGGAATTGTATTGGGATTAGAAGTCTCGCGCCTTGCCCGCAACAATGCTGATTGGCATCGCCTTCTCGAACTCGCCGCTCTAGGGCGCACCTTAATTCTTGATGAAGATGGTATTTATGATCCAAGGGAACCAAATGATAGATTACTTTTGGGCATAAAAGGCACACTCTCAGAGGCAGAGCTTCATGTTCTGAAAGCGAGACTGCATGGAGGAATTATCAACAAAGCTCGTAGAGGAGAGCTTGAGATACCATTGCCTATTGGGTTTGTCTATCAAGACAATGGTTCAGTAGCACTGGACCCTGATCAACAAATTCAAAATGCTATACGGCTTGTTTTTGGAAGCTTTAAACAACTCGGCGCAGCGACGGCGGTAGTTAGAAAATTTGCAGCTGAAGACCTCTTGTTTCCCAGACGTATCCGTGGGGGTACCAATAAGGGGGACATCGTGTGGGGAGAGATGCAACATGCTCGCGTGCTTCAGATTTTACACAACCCTCGCTATGCTGGTGCCTTTGTTTTTGGACGCACTCGGAGTGGTCGAACCGCAGATCTTAGATGCACCCAAATCAAAGTGGCTCGTAAAGATTGGCAAGTGTTTATTCCCAAAGTCCATGAAGGATATATTGATTTGGAAACATTTGAATATAACCAGGTAAAGTTGGCAAATAATGCGATGAGTTTGAACCCAGCCAGTCGAGGGTCTGTCGCTCGAGAGGGATCTGCTCTACTGCAGGGCCGTGTTATATGTGGCATCTGCGGTTCACGTATTCGAGTCCGCTATTCTTCTCGTGAGCATGGACAACTCGAACCCTATTATGCATGTGCAGAAGCTTCCATTAGAAAAGCGGGCAAGCTTTGCCAGTATGTGAGGGGGGTAAATATTGATGCTGCCGTGTGTGATCTGCTCCAAGAAGTCTTTACTCCAGCGGCAATTGAGGTTGCTCTTGCTGTTCAACAGGAGCTTGCAGAACGTGCTCAACATATTGATGAATTACGACAACAGCAATTTGAGCGAGCGCGCTACGAGGCAGAACTTGCCAGGCGGCGCTACCTAAAAGTTGACCCAGATAACCGGCTTGTCGCCGATACGTTAGAAGCAGATTGGAACGAAAAACTTCGCCTGCTTAATCAACTACAACAAGAGCAAGATCAGCAACGTAAAACCGATCCCTCCCTCTTGCCCAAAGATGCGGCCTCACATATTATAAACCTGGAAAAAGATTTTTCTCGTATTTGGAGTGATCCGTGCATTCCAGCTCTTGAACGAAAAAGAATTATTGCTTATCTCATTGAGGATGTTACCTTGATAAAGAAAGAGCAGATTACCCTACATGTCCGCTTTAAAGGAGGGAAGACGCACACTCTTTCAATGCCGCGCCCCATGCCTATCGCTATGCTTCGTAAAACGCGGCCTGAAATTGTCGCAGTCCTCGACCAATTACTTGACACTGGTACAGATCTGGTAGCAGCGGCAGAGCTTAATAAGAGAGGATACAAAAACTGGAGAGGAGAGCAACTTACCCATGAAAAGGTGCGACACATTCGACAAGCTTATGGCTTAAAAAGTCGTTTTGAACGCTTGCGAGAACAGGGGTTCCTAACTGGAGATGAAATGGCAAAAAAATTTAGTGTATCAACAACTACGATTCATGAGAGAGGAAGAGAGGGAATTCTGCATCGCCAACTTTATGGGAATAACAAGCTCTTCTTATATGAGCCTCTTCCCGATAATTATGTTTTTGTTAAGAGGCAATGTGGGCGTCGTTCGGCGTCACAAAATTTAATTACCGTCCAACCTGCTGAATGA
PROTEIN sequence
Length: 692
MPIDSSHKITEQHTNRDAFLYVRQSSLRQVIENTESTKRQYALRERAIALGWPIERIHTIDSDLGKSGAESVNRDGFQQLVTEVALGNAGIVLGLEVSRLARNNADWHRLLELAALGRTLILDEDGIYDPREPNDRLLLGIKGTLSEAELHVLKARLHGGIINKARRGELEIPLPIGFVYQDNGSVALDPDQQIQNAIRLVFGSFKQLGAATAVVRKFAAEDLLFPRRIRGGTNKGDIVWGEMQHARVLQILHNPRYAGAFVFGRTRSGRTADLRCTQIKVARKDWQVFIPKVHEGYIDLETFEYNQVKLANNAMSLNPASRGSVAREGSALLQGRVICGICGSRIRVRYSSREHGQLEPYYACAEASIRKAGKLCQYVRGVNIDAAVCDLLQEVFTPAAIEVALAVQQELAERAQHIDELRQQQFERARYEAELARRRYLKVDPDNRLVADTLEADWNEKLRLLNQLQQEQDQQRKTDPSLLPKDAASHIINLEKDFSRIWSDPCIPALERKRIIAYLIEDVTLIKKEQITLHVRFKGGKTHTLSMPRPMPIAMLRKTRPEIVAVLDQLLDTGTDLVAAAELNKRGYKNWRGEQLTHEKVRHIRQAYGLKSRFERLREQGFLTGDEMAKKFSVSTTTIHERGREGILHRQLYGNNKLFLYEPLPDNYVFVKRQCGRRSASQNLITVQPAE*