ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_1262_16

Organism: Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_42_100

near complete RP 46 / 55 BSCG 48 / 51 ASCG 11 / 38
Location: comp(17032..17928)

Top 3 Functional Annotations

Value Algorithm Source
UbiA prenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 298.0
  • Bit_score: 588
  • Evalue 4.60e-165
UbiA prenyltransferase id=4921015 bin=GWC2_Alphaproteobacteria_42_16 species=gamma proteobacterium HdN1 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 299.0
  • Bit_score: 588
  • Evalue 3.30e-165
UbiA prenyltransferase similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 307.0
  • Bit_score: 326
  • Evalue 1.10e-86

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Alphaproteobacteria_42_30 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGCGGCGGTTTTTTGCACTTTCTCGCACTCCTCATGGCATTTTAGATATTGCAACGCCAGCTTTTTGTGCCTTGTTATGGTTGGGGGCTTTTCCGCCTCATGAGGTTATTCTTTTGGCCTTGGCAACAGCCTTTTCTGGCTATACAGCCATCTACGCATTAAATGATTTGGTTGGCTTTCAAGAGGATAAGAAAAAGTTTTCCGAAGCGAGTTCCTATTCTGGTTTTTCAGTAGACGCATCAGTTTTCCACCACCCGATTGCCCAAGGGCTTTTGAATTATAGATCTGGAATTTACTGGGCTACGTTCTGGTTCTCTTTAGCATTATTAGGCGCTTATTTCCTTAACCCCGTGATTATCTTAATTCTCCTTGTTGGAGCCATTCTAGAGATTATTTATTGTCGTTTATTAAAGGTAACCTACTTGCGCACACTCATAAGTGGGGTTGTTAAGACTTGTGGGCCTATTGCTGCAATATTTGTCGTAACGCCCTCTCCCTCCGTGTTTTCCTTACTTTTGATATTTAGCTGGGTGTTTTTATGGGAAATCGGGGGACAAAACATTCCAGCAGATATGAACGATGAAAAAGAGGATAAGCGCATTCATGCACAAACGATCCCTGTCCGATTCGGAGCCAATATCGCAGCCTTTATCATTTTGATAACGCTCCTTCTTACAACTCTTATAAGTTGCTTTCTTCCCTTAATCTCTCCACTTCAGCTTGGCATCCCTTATGTTCTTCTCAGCTTGGCCGCGGGCTATTATTTTTTACTTGAACCTGCTTTCCAACTTTATAAAACAAAAAAAAGCATCTTCGCTTCAAAACTGTTTGATAGGGCCAGCTATTACCCTTTGGCCCTTTTGATTTTAATATCCTTATCGATCCTTTTCGTATGA
PROTEIN sequence
Length: 299
MRRFFALSRTPHGILDIATPAFCALLWLGAFPPHEVILLALATAFSGYTAIYALNDLVGFQEDKKKFSEASSYSGFSVDASVFHHPIAQGLLNYRSGIYWATFWFSLALLGAYFLNPVIILILLVGAILEIIYCRLLKVTYLRTLISGVVKTCGPIAAIFVVTPSPSVFSLLLIFSWVFLWEIGGQNIPADMNDEKEDKRIHAQTIPVRFGANIAAFIILITLLLTTLISCFLPLISPLQLGIPYVLLSLAAGYYFLLEPAFQLYKTKKSIFASKLFDRASYYPLALLILISLSILFV*